RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SETMARQ53H47 684 aaPredicted RBP3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 DGAT2L7PQ6IED9 249 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 GALNT7Q86SF2 657 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SMIM29Q86T20 159 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SERPINA11Q86U17 422 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 WDR5BQ86VZ2 330 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SLC44A2Q8IWA5 706 aaPredicted RBP3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SYTL1Q8IYJ3 562 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 VPS52Q8N1B4 723 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SCAMP5Q8TAC9 235 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 ZNF333Q96JL9 665 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SEPSECSQ9HD40 501 aaKnown RBP3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 OBP2BQ9NPH6 170 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 OCIAD1Q9NX40 245 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 C19orf53Q9UNZ5 99 aaPredicted RBP3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SLC45A1Q9Y2W3 748 aa3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SRPRBQ9Y5M8 271 aaKnown RBP3.18□□□□□ -1.9
GTF3C3-209ENST00000466862 SHROOM4Q9ULL8 1493 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 A0A0B4J293 547 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 RNMTO43148 476 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ASAP2O43150 1006 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 KCNJ13O60928 360 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 KRT36O76013 467 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 HLA-DQA2P01906 255 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 NAGAP17050 411 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 TCEA1P23193 301 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 AVPR2P30518 371 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 CDH12P55289 794 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 CTTNQ14247 550 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 STARD3Q14849 445 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ZACNQ401N2 412 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ATG9BQ674R7 924 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 KSR2Q6VAB6 950 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ZNF771Q7L3S4 317 aaPredicted RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 RAB11FIP2Q7L804 512 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 SRLQ86TD4 932 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ARRDC3Q96B67 414 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 MYD88Q99836 296 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 MSTO1Q9BUK6 570 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 PABPC3Q9H361 631 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 CLK4Q9HAZ1 481 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ARNT2Q9HBZ2 717 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 CDH22Q9UJ99 828 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 ERRFI1Q9UJM3 462 aaPredicted RBP3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 SLC25A13Q9UJS0 675 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 KIF26BQ2KJY2 2108 aa3.17□□□□□ -1.9
GTF3C3-209ENST00000466862 A0A087WV62 115 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 LOC102724159A0A0B4J2E5 919 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 C17orf102A2RUQ5 167 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 DENND3A2RUS2 1198 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 TMEM247A6NEH6 219 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 EFCAB8A8MWE9 144 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 NPIPB11E5RHQ5 1161 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 ACTL6BO94805 426 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 ITGA2BP08514 1039 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 ACP5P13686 325 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 TECP42680 631 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 PCP4P48539 62 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 MXI1P50539 228 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 MYBPC2Q14324 1141 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 PWP2Q15269 919 aaKnown RBP3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 KIF19Q2TAC6 998 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 RBFAQ8N0V3 343 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 PTGR2Q8N8N7 351 aaPredicted RBP3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 SCAIQ8N9R8 606 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 MIGA1Q8NAN2 632 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 STT3BQ8TCJ2 826 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 GPT2Q8TD30 523 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 TMEM18Q96B42 140 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 PIGSQ96S52 555 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 SLC25A33Q9BSK2 321 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 TRIM31Q9BZY9 425 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 CLPBQ9H078 707 aa3.16□□□□□ -1.9
GTF3C3-209ENST00000466862 A0A0U1RQJ8 604 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 DYTNA2CJ06 578 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 DDTLA6NHG4 134 aaPredicted RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 BMPR1BO00238 502 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 FFAR2O15552 330 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 MMP3P08254 477 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 NBPF7P0C2Y1 421 aaPredicted RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ENO3P13929 434 aaPredicted RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ARSAP15289 507 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 CHN1P15882 459 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 GSTM2P28161 218 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 SERPINA4P29622 427 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 SERPINF1P36955 418 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 AP2B1P63010 937 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ADORA2A-AS1P86434 159 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 BTKQ06187 659 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ALKBH1Q13686 389 aaKnown RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 EFHC1Q5JVL4 640 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 CCDC181Q5TID7 509 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 AADACL2Q6P093 401 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 BRSK2Q8IWQ3 736 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 TCP11L2Q8N4U5 519 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ZNF114Q8NC26 417 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 OR4N2Q8NGD1 307 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 KCNJ9Q92806 393 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 IGSF21Q96ID5 467 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms