RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PCDH20Q8N6Y1 951 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 CASKIN2Q8WXE0 1202 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 NELL1Q92832 810 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 ISG20Q96AZ6 181 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 MRGPRX1Q96LB2 322 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 MKRN2Q9H000 416 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 SLC6A17Q9H1V8 727 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 TNKS2Q9H2K2 1166 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 ZSCAN32Q9NX65 697 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 HCN4Q9Y3Q4 1203 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
DNMT3A-208ENST00000466601 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 MAFKO60675 156 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 ZNF821O75541 412 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 TMCC1O94876 653 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 MAP3K6O95382 1288 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 MX2P20592 715 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 GARSP41250 739 aaKnown RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 ELAVL3Q14576 367 aaKnown RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 RPS6KA1Q15418 735 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 CYTH1Q15438 398 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 KIAA1324Q6UXG2 1013 aaKnown RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 NPNTQ6UXI9 565 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 LONP2Q86WA8 852 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 OR8D1Q8WZ84 308 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 PRCCQ92733 491 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 SIPA1Q96FS4 1042 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 CCDC114Q96M63 670 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 FAM129BQ96TA1 746 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 HEMGNQ9BXL5 484 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 OSBPL8Q9BZF1 889 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 TPSD1Q9BZJ3 242 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 RSPH9Q9H1X1 276 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 DTLQ9NZJ0 730 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 EFR3BQ9Y2G0 817 aa14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 FARP1Q9Y4F1 1045 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-208ENST00000466601 USP27XA6NNY8 438 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 MCF2LO15068 1137 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 RNASEH1O60930 286 aaKnown RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 TGM2P21980 687 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 PTPN7P35236 360 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 RECQLP46063 649 aaPredicted RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 PTPN5P54829 565 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 RPS14P62263 151 aaKnown RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 ADCY2Q08462 1091 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 ZNF211Q13398 564 aaPredicted RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 RFTN1Q14699 578 aaPredicted RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 CARD16Q5EG05 197 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 ZNF776Q68DI1 518 aaPredicted RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 AADACL2Q6P093 401 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 BBS12Q6ZW61 710 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 PLPP6Q8IY26 295 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 OR2A12Q8NGT7 310 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 NSMCE1Q8WV22 266 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 ZNF599Q96NL3 588 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 TM6SF2Q9BZW4 377 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 NYNRINQ9P2P1 1898 aaKnown RBP14.71□□□□□ -0.05
DNMT3A-208ENST00000466601 GOLGA6L9A6NEM1 432 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 ALOX15BO15296 676 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 PEX11BO96011 259 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 C7P10643 843 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 ACADMP11310 421 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 CCNCP24863 283 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 NR2C2P49116 596 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 RHOAP61586 193 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 SNRPD1P62314 119 aaKnown RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 LBRQ14739 615 aaKnown RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 PDK1Q15118 436 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 ZNF569Q5MCW4 686 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 DCAF12L1Q5VU92 463 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 TIGD7Q6NT04 549 aaPredicted RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 DPY19L3Q6ZPD9 716 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 BZW1Q7L1Q6 419 aaKnown RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 DSG4Q86SJ6 1040 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 CACUL1Q86Y37 369 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 MMAAQ8IVH4 418 aaKnown RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 CHST14Q8NCH0 376 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 ZBTB44Q8NCP5 570 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 CCNYQ8ND76 341 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 OR2AP1Q8NGE2 309 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 P3H4Q92791 437 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 HDAC11Q96DB2 347 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 TSGA13Q96PP4 275 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 HERPUD2Q9BSE4 406 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 CINPQ9BW66 212 aaPredicted RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 SAE1Q9UBE0 346 aaPredicted RBP14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 LHX3Q9UBR4 397 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 PCDHGA2Q9Y5H1 932 aa14.7□□□□□ -0.06
DNMT3A-208ENST00000466601 PPP1R12AO14974 1030 aaPredicted RBP14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 KIF5CO60282 957 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 ZNF217O75362 1048 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 TJP3O95049 919 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 IGSF6O95976 241 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 GSRP00390 522 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 DNTTP04053 509 aa14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 PECAM1P16284 738 aaPredicted RBP14.69□□□□□ -0.06
DNMT3A-208ENST00000466601 CHRNA3P32297 505 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms