RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 KRT3P12035 628 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 MMP8P22894 467 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 GLDCP23378 1020 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 SERPINH1P50454 418 aaKnown RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 NEK3P51956 506 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 COPB1P53618 953 aaKnown RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 MYL5Q02045 173 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 C15orf59Q2T9L4 293 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 ARCQ7LC44 396 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 PCDH20Q8N6Y1 951 aaKnown RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 CHST14Q8NCH0 376 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 SAP25Q8TEE9 199 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 CEP44Q9C0F1 390 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 TOR4AQ9NXH8 423 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 DNAI1Q9UI46 699 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 NOCTQ9UK39 431 aaKnown RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 LEFTY1O75610 366 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 CALB1P05937 261 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 CTSLP07711 333 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 GPD1P21695 349 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 HNRNPA2B1P22626 353 aaKnown RBP17.88■□□□□ 0.45
COL7A1-206ENST00000466591 DAB2P98082 770 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 FMO1Q01740 532 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 DNAJC3Q13217 504 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 CARD16Q5EG05 197 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 PIP5KL1Q5T9C9 394 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 CDKAL1Q5VV42 579 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 DPY19L2P1Q6NXN4 242 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 SCYL2Q6P3W7 929 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 DPY19L3Q6ZPD9 716 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 HORMAD1Q86X24 394 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 FAM172AQ8WUF8 416 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 TBC1D31Q96DN5 1066 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 HEPHQ9BQS7 1158 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 TM6SF2Q9BZW4 377 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 FZD3Q9NPG1 666 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 ARHGAP20Q9P2F6 1191 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 PPARGC1AQ9UBK2 798 aaKnown RBP17.88■□□□□ 0.45
COL7A1-206ENST00000466591 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
COL7A1-206ENST00000466591 CA5BQ9Y2D0 317 aa17.88■□□□□ 0.45
COL7A1-206ENST00000466591 FCF1Q9Y324 198 aaKnown RBP17.88■□□□□ 0.45
COL7A1-206ENST00000466591 I6L893 689 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 RAMP2O60895 175 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 CYP1A1P04798 512 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 ADRA1BP35368 520 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 MAPKAPK2P49137 400 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 CCNHP51946 323 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 BNIP3Q12983 259 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 EFHC2Q5JST6 749 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 DNAJC24Q6P3W2 148 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 STRADAQ7RTN6 431 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 PTAR1Q7Z6K3 402 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 TMPRSS12Q86WS5 348 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 PDCD7Q8N8D1 485 aaKnown RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 GPT2Q8TD30 523 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 NAT10Q9H0A0 1025 aaKnown RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 HECAQ9UBI9 543 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 PCDHGA1Q9Y5H4 931 aa17.87■□□□□ 0.45
COL7A1-206ENST00000466591 TP53BP1Q12888 1972 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-206ENST00000466591 TRABD2BA6NFA1 517 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 LGALS16A8MUM7 142 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 KRIT1O00522 736 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 C1SP09871 688 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 ALPPL2P10696 532 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 RHOQP17081 205 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 RXRGP48443 463 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 JAM2P57087 298 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 SNRPD1P62314 119 aaKnown RBP17.86■□□□□ 0.45
COL7A1-206ENST00000466591 RPS21P63220 83 aaKnown RBP17.86■□□□□ 0.45
COL7A1-206ENST00000466591 SGCGQ13326 291 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 CCDC14Q49A88 953 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 TRNP1Q6NT89 227 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 DCUN1D2Q6PH85 259 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 SPATS2Q86XZ4 545 aaKnown RBP17.86■□□□□ 0.45
COL7A1-206ENST00000466591 MARCH9Q86YJ5 346 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 JOSD2Q8TAC2 188 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 FAM131CQ96AQ9 280 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 FEM1CQ96JP0 617 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 HDAC8Q9BY41 377 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 EVA1BQ9NVM1 165 aa17.86■□□□□ 0.45
COL7A1-206ENST00000466591 C2CD4BA6NLJ0 364 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 A6NNZ2 444 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 FFAR2O15552 330 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 GJB6O95452 261 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 MBD3O95983 291 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 PLEKP08567 350 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-206ENST00000466591 ADRB3P13945 408 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 ITGB7P26010 798 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 ACVRL1P37023 503 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 PTPN9P43378 593 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 TAS2R38P59533 333 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 ARF5P84085 180 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 RAD51Q06609 339 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 CYP4F3Q08477 520 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 SHBQ15464 509 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 SMAD1Q15797 465 aaKnown RBP17.85■□□□□ 0.45
COL7A1-206ENST00000466591 CLEC16AQ2KHT3 1053 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 KIAA1161Q6NSJ0 714 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms