RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GET4Q7L5D6 327 aaPredicted RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 CDKL3Q8IVW4 592 aaPredicted RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 NPAS3Q8IXF0 933 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 FGF13Q92913 245 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 ZNF419Q96HQ0 510 aaPredicted RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 C9orf72Q96LT7 481 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 SAYSD1Q9NPB0 183 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 PRKAG3Q9UGI9 489 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 SMG5Q9UPR3 1016 aaKnown RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 EXOC1LA0A1B0GW35 172 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 GFRA2O00451 464 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 PRPF4O43172 522 aaKnown RBP eCLIP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 MAFKO60675 156 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 ACVRL1P37023 503 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 PREPLQ4J6C6 727 aaPredicted RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 FSCBQ5H9T9 825 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 SRRM1Q8IYB3 904 aaKnown RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 CYP4X1Q8N118 509 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 UMODL1-AS1Q8N2C9 162 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 FETUBQ9UGM5 382 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 SLC24A2Q9UI40 661 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 LSM7Q9UK45 103 aaKnown RBP18.98■□□□□ 0.63
CAPN3-209ENST00000466222 CLEC4EQ9ULY5 219 aa18.98■□□□□ 0.63
CAPN3-209ENST00000466222 RASA4BC9J798 803 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 J3KR12 359 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 SMAPO00193 183 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 PPP1R12AO14974 1030 aaPredicted RBP18.97■□□□□ 0.63
CAPN3-209ENST00000466222 RASA4O43374 803 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 TBL1XO60907 577 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 FSHRP23945 695 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 PPIDQ08752 370 aaKnown RBP18.97■□□□□ 0.63
CAPN3-209ENST00000466222 CCDC15Q0P6D6 951 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 ZBTB17Q13105 803 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 WLSQ5T9L3 541 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 CENPUQ71F23 418 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 TRABD2AQ86V40 505 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 WFDC5Q8TCV5 224 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 HDAC11Q96DB2 347 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 RTP4Q96DX8 246 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 ABCF3Q9NUQ8 709 aa18.97■□□□□ 0.63
CAPN3-209ENST00000466222 TCRBV7S3A2A0A539 114 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 HACD1B0YJ81 288 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 RNF103O00237 685 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ALOX15BO15296 676 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 METTL18O95568 372 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 LTBRP36941 435 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 SKIV2L2P42285 1042 aaKnown RBP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 GAD2Q05329 585 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 MTA1Q13330 715 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 MPP2Q14168 576 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 FAM78AQ5JUQ0 283 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 RABGAP1LQ5R372 815 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 LZTR1Q8N653 840 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 USP33Q8TEY7 942 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 TMA16Q96EY4 203 aaKnown RBP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 S1PR5Q9H228 398 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 KLHL14Q9P2G3 628 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 RAMP2O60895 175 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 UBOX5O94941 541 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 PFKLP17858 780 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 MX2P20592 715 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 BNIP1Q12981 228 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 MTM1Q13496 603 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 TMED2Q15363 201 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ZNF77Q15935 545 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 RNASEH2BQ5TBB1 312 aaKnown RBP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ANKRD22Q5VYY1 191 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ZNF354CQ86Y25 554 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 FAM217AQ8IXS0 508 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ZNF567Q8N184 647 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ATPAF2Q8N5M1 289 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 TDRD5Q8NAT2 981 aaKnown RBP18.96■□□□□ 0.63
CAPN3-209ENST00000466222 OR7D4Q8NG98 312 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 CD248Q9HCU0 757 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 TBK1Q9UHD2 729 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ACTL7AQ9Y615 435 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 WNT6Q9Y6F9 365 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 ATG2AQ2TAZ0 1938 aa18.96■□□□□ 0.63
CAPN3-209ENST00000466222 CLUHO75153 1309 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 PRRC2BQ5JSZ5 2229 aaKnown RBP18.95■□□□□ 0.62
CAPN3-209ENST00000466222 CDH4P55283 916 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 POLD3Q15054 466 aaPredicted RBP18.95■□□□□ 0.62
CAPN3-209ENST00000466222 CTC1Q2NKJ3 1217 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 ANKRD20A2Q5SQ80 823 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 ANKRD20A1Q5TYW2 823 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 ANKRD20A3Q5VUR7 823 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 TMEM25Q86YD3 366 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 CARNMT1Q8N4J0 409 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 GDAP1Q8TB36 358 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 DDI1Q8WTU0 396 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 AGAP3Q96P47 875 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 SSU72Q9NP77 194 aaKnown RBP18.95■□□□□ 0.62
CAPN3-209ENST00000466222 RAB6BQ9NRW1 208 aa18.95■□□□□ 0.62
CAPN3-209ENST00000466222 IPO11Q9UI26 975 aaKnown RBP18.95■□□□□ 0.62
CAPN3-209ENST00000466222 MYO9BQ13459 2157 aa18.94■□□□□ 0.62
CAPN3-209ENST00000466222 E2F8A0AVK6 867 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms