RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 THAP10Q9P2Z0 257 aaPredicted RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 LHX3Q9UBR4 397 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 NEU2Q9Y3R4 380 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 C5orf60A6NFR6 353 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 RNF103O00237 685 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 KCNN4O15554 427 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 MTSS1O43312 755 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ZNF189O75820 626 aaPredicted RBP11.34□□□□□ -0.59
VCP-204ENST00000466100 HLA-DQB2P05538 268 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ATP5BP06576 529 aaKnown RBP11.34□□□□□ -0.59
VCP-204ENST00000466100 CD72P21854 359 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 PTGIRP43119 386 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 RGRP47804 291 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 SLC20A2Q08357 652 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 FZD5Q13467 585 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ZNF234Q14588 700 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 LBRQ14739 615 aaKnown RBP11.34□□□□□ -0.59
VCP-204ENST00000466100 DGKKQ5KSL6 1271 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 EMC10Q5UCC4 262 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ALG1LQ6GMV1 187 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 C22orf39Q6P5X5 142 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 PGBD5Q8N414 524 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 FAM71DQ8N9W8 422 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 LRRN4CLQ8ND94 238 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 FRS2Q8WU20 508 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 VOPP1Q96AW1 172 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ISG20Q96AZ6 181 aaKnown RBP11.34□□□□□ -0.59
VCP-204ENST00000466100 PSKH2Q96QS6 385 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 MGME1Q9BQP7 344 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 CEP41Q9BYV8 373 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 CEP44Q9C0F1 390 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 TMEM245Q9H330 911 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 LTB4R2Q9NPC1 389 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 SEPT3Q9UH03 358 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 AMACRQ9UHK6 382 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 SLCO3A1Q9UIG8 710 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 SLC25A13Q9UJS0 675 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ZNF148Q9UQR1 794 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 ATP8A1Q9Y2Q0 1164 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
VCP-204ENST00000466100 WDFY4Q6ZS81 3184 aa11.34□□□□□ -0.59
VCP-204ENST00000466100 MYLKQ15746 1914 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 GCATO75600 419 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 JCHAINP01591 159 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 CHRNB1P11230 501 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 CR2P20023 1033 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 TARSP26639 723 aaKnown RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 STIP1P31948 543 aaKnown RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 CD68P34810 354 aaPredicted RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 IL12RB1P42701 662 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 MMP13P45452 471 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 RENBPP51606 427 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 GRSF1Q12849 480 aaKnown RBP eCLIP11.33□□□□□ -0.6
VCP-204ENST00000466100 IHHQ14623 411 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 TEX44Q53QW1 395 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 ZNF852Q6ZMS4 543 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 NUDT18Q6ZVK8 323 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 KLHL7Q8IXQ5 586 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 KLHDC8BQ8IXV7 354 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 ZNF567Q8N184 647 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 SIX5Q8N196 739 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 CEP112Q8N8E3 955 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 NOA1Q8NC60 698 aaKnown RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
VCP-204ENST00000466100 MNS1Q8NEH6 495 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 USP33Q8TEY7 942 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 UCMAQ8WVF2 138 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 TEKT5Q96M29 485 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 NSMCE3Q96MG7 304 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 SPATA13Q96N96 652 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 ACOX2Q99424 681 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 KRT12Q99456 494 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 VAT1Q99536 393 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 GORASP1Q9BQQ3 440 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
VCP-204ENST00000466100 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 FBXL21Q9UKT6 434 aa11.33□□□□□ -0.6
VCP-204ENST00000466100 KANSL1LA0AUZ9 987 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CTAGE15A4D2H0 777 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 TTC34A8MYJ7 566 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 SGK1O00141 431 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 NPC1O15118 1278 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 OPHN1O60890 802 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ADAM23O75077 832 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 GSRP00390 522 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CTAGE8P0CG41 777 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ETS1P14921 441 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms