RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 UXTQ9UBK9 157 aaPredicted RBP5.68□□□□□ -1.5
VPS41-211ENST00000466017 CHORDC1Q9UHD1 332 aaPredicted RBP5.68□□□□□ -1.5
VPS41-211ENST00000466017 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
VPS41-211ENST00000466017 GPR160Q9UJ42 338 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 MSRAQ9UJ68 235 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 FBXW11Q9UKB1 542 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 FZD10Q9ULW2 581 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 GPR55Q9Y2T6 319 aaPredicted RBP5.68□□□□□ -1.5
VPS41-211ENST00000466017 CEP350Q5VT06 3117 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 GREB1Q4ZG55 1949 aa5.68□□□□□ -1.5
VPS41-211ENST00000466017 MTCL1Q9Y4B5 1905 aaKnown RBP5.68□□□□□ -1.5
VPS41-211ENST00000466017 PATJQ8NI35 1801 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 C3orf70A6NLC5 250 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 PGRMC1O00264 195 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 CAPN9O14815 690 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SMAD7O15105 426 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ZNF185O15231 689 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 TGM5O43548 720 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 PRPSAP2O60256 369 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CEP104O60308 925 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 LPXNO60711 386 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SRGAP2O75044 1071 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 ZNF189O75820 626 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 TJP3O95049 919 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 GJB6O95452 261 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 FGF19O95750 216 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 GSTM1P09488 218 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 C1QTNF9P0C862 333 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SLC2A3P11169 496 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 NCAM1P13591 858 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 ZFXP17010 805 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ATF6P18850 670 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 IL4RP24394 825 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 IL1R2P27930 398 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 L1CAMP32004 1257 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CTNNB1P35222 781 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 ADRA1BP35368 520 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 EPHB3P54753 998 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 EPHA5P54756 1037 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ARPP19P56211 112 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 RNASE9P60153 205 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 SMAD3P84022 425 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 DEUP1Q05D60 604 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 TAF10Q12962 218 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 KLF1Q13351 362 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 GPM6BQ13491 265 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 VEPH1Q14D04 833 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CCNG2Q16589 344 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 C15orf59Q2T9L4 293 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ARL13BQ3SXY8 428 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 HSF5Q4G112 596 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 DCAF6Q58WW2 860 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 TFDP3Q5H9I0 405 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SEL1L2Q5TEA6 688 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 KIAA1211LQ6NV74 962 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SYDE1Q6ZW31 735 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 CYP4V2Q6ZWL3 525 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 KIAA1958Q8N8K9 716 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 EIF1ADQ8N9N8 165 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 LEMD2Q8NC56 503 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 KREMEN2Q8NCW0 462 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SCAMP5Q8TAC9 235 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CLEC4CQ8WTT0 213 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 RNF139Q8WU17 664 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 FAM172AQ8WUF8 416 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 RUBCNQ92622 972 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 B3GALT6Q96L58 329 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CFAP57Q96MR6 1250 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SERPINB11Q96P15 392 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 PGLYRP2Q96PD5 576 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CDCA3Q99618 268 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ZNF670Q9BS34 389 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CARD6Q9BX69 1037 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 OSBPL8Q9BZF1 889 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 SMOC2Q9H3U7 446 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 WDCPQ9H6R7 721 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 LRRC19Q9H756 370 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 NMUR1Q9HB89 426 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 CYP4F11Q9HBI6 524 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS41-211ENST00000466017 ARHGEF38Q9NXL2 777 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 MTUS1Q9ULD2 1270 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 PACSIN2Q9UNF0 486 aaPredicted RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 DRG1Q9Y295 367 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 YBX2Q9Y2T7 364 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 HBS1LQ9Y450 684 aaKnown RBP5.67□□□□□ -1.5
VPS41-211ENST00000466017 KIAA1671Q9BY89 1806 aa5.67□□□□□ -1.5
VPS41-211ENST00000466017 DNAH12Q6ZR08 3092 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 hCG_1818297A0A087WSY0 165 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TARSL2A2RTX5 802 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 FITM1A5D6W6 292 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ZNF840PA6NDX5 716 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TMEM110-MUSTN1A8MSY1 372 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms