RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 RFFLQ8WZ73 363 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 TSC1Q92574 1164 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 CELF6Q96J87 481 aaKnown RBP26.42■■□□□ 1.82
SMC4-206ENST00000465903 BTBD1Q9H0C5 482 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 VPS45Q9NRW7 570 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 DONSONQ9NYP3 566 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 LCMT1Q9UIC8 334 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 NCKAP1Q9Y2A7 1128 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 MFHAS1Q9Y4C4 1052 aa26.42■■□□□ 1.82
SMC4-206ENST00000465903 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.42■■□□□ 1.82
SMC4-206ENST00000465903 METTL12A8MUP2 240 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 H3BRJ5 948 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 CHRNA3P32297 505 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 DRD3P35462 400 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 SSR1P43307 286 aaKnown RBP26.41■■□□□ 1.82
SMC4-206ENST00000465903 MESDQ14696 234 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 DPY19L3Q6ZPD9 716 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 DSG4Q86SJ6 1040 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 TMTC1Q8IUR5 882 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 SYT12Q8IV01 421 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 HDDC3Q8N4P3 179 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 PCDH20Q8N6Y1 951 aaKnown RBP26.41■■□□□ 1.82
SMC4-206ENST00000465903 NPWQ8N729 165 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 PIP4K2CQ8TBX8 421 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 ISG20Q96AZ6 181 aaKnown RBP26.41■■□□□ 1.82
SMC4-206ENST00000465903 CSPG4P5Q96PW8 444 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 C6orf106Q9H6K1 298 aaPredicted RBP26.41■■□□□ 1.82
SMC4-206ENST00000465903 SGK2Q9HBY8 427 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 ETNK2Q9NVF9 386 aa26.41■■□□□ 1.82
SMC4-206ENST00000465903 ATXN2Q99700 1313 aaKnown RBP26.4■■□□□ 1.82
SMC4-206ENST00000465903 SHROOM3Q8TF72 1996 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 SOWAHDA6NJG2 315 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 TMEM110-MUSTN1A8MSY1 372 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 PATE3B3GLJ2 98 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 PLK4O00444 970 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 BUB1O43683 1085 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 ARL4AP40617 200 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 CARD16Q5EG05 197 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 TCEAL6Q6IPX3 200 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 ZNF354CQ86Y25 554 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 TP53INP2Q8IXH6 220 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 GANCQ8TET4 914 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 FOXJ1Q92949 421 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 TCEAL3Q969E4 200 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 FAM131CQ96AQ9 280 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 VOPP1Q96AW1 172 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 TFR2Q9UP52 801 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 PCDHA13Q9Y5I0 950 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 EPN1Q9Y6I3 576 aaPredicted RBP26.4■■□□□ 1.82
SMC4-206ENST00000465903 WASF2Q9Y6W5 498 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 CACNA1EQ15878 2313 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 DMXL1Q9Y485 3027 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 SPTBN4Q9H254 2564 aa26.4■■□□□ 1.82
SMC4-206ENST00000465903 ZSCAN5CA6NGD5 496 aaPredicted RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 C10orf142B7Z368 130 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 RNASEH2AO75792 299 aaKnown RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 SEMA4FO95754 770 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 CD48P09326 243 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 MAOBP27338 520 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 CYLC1P35663 651 aaPredicted RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 ARHGAP25P42331 645 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 PAPOLAP51003 745 aaKnown RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 GEMIN4P57678 1058 aaKnown RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 SFSWAPQ12872 951 aaKnown RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 DCAF12L1Q5VU92 463 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 PLPP6Q8IY26 295 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 SPC24Q8NBT2 197 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 TMIEQ8NEW7 156 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 DNASE2BQ8WZ79 361 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 CCDC114Q96M63 670 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 OMDQ99983 421 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 PCED1AQ9H1Q7 454 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 PDFQ9HBH1 243 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 RXFP3Q9NSD7 469 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 IMPACTQ9P2X3 320 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 FZD4Q9ULV1 537 aa26.39■■□□□ 1.82
SMC4-206ENST00000465903 FARP1Q9Y4F1 1045 aaPredicted RBP26.39■■□□□ 1.82
SMC4-206ENST00000465903 LAMA1P25391 3075 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 C1QTNF3-AMACRE9PGA6 284 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 J3KR12 359 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 CDH6P55285 790 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 MMRN1Q13201 1228 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 INO80DQ53TQ3 878 aaPredicted RBP26.38■■□□□ 1.81
SMC4-206ENST00000465903 FAM46CQ5VWP2 391 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 RAD9BQ6WBX8 426 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 TMEM139Q8IV31 216 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 TM6SF2Q9BZW4 377 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 PLXNA2O75051 1894 aa26.38■■□□□ 1.81
SMC4-206ENST00000465903 ARHGAP42A6NI28 874 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 PRAMEF11O60813 436 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 TMCC1O94876 653 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 NDUFA10O95299 355 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 GJC1P36383 396 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 DNA2P51530 1060 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 CCNHP51946 323 aaPredicted RBP26.37■■□□□ 1.81
SMC4-206ENST00000465903 CNTN1Q12860 1018 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 CYTH1Q15438 398 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 POM121L1PQ3SYA9 428 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 ARSIQ5FYB1 569 aa26.37■■□□□ 1.81
SMC4-206ENST00000465903 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms