RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 FATE1Q969F0 183 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 SIPA1Q96FS4 1042 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 HES6Q96HZ4 224 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 MKRN2Q9H000 416 aaKnown RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 SP110Q9HB58 689 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 PDFQ9HBH1 243 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 UBA2Q9UBT2 640 aaPredicted RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 GOLGA6L9A6NEM1 432 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 K7ERQ8 282 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 SMAD6O43541 496 aaKnown RBP17.26■□□□□ 0.35
USP39-211ENST00000465282 LILRB5O75023 590 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 NDUFV2P19404 249 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 MARCKSL1P49006 195 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 FNTBP49356 437 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 NUMBP49757 651 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 SNRPD1P62314 119 aaKnown RBP17.26■□□□□ 0.35
USP39-211ENST00000465282 ZNF33AQ06730 810 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 GALNT2Q10471 571 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 ZNF776Q68DI1 518 aaPredicted RBP17.26■□□□□ 0.35
USP39-211ENST00000465282 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
USP39-211ENST00000465282 TIGD7Q6NT04 549 aaPredicted RBP17.26■□□□□ 0.35
USP39-211ENST00000465282 RFX6Q8HWS3 928 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 CCDC50Q8IVM0 306 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 ATPAF2Q8N5M1 289 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 TSGA13Q96PP4 275 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 MFHAS1Q9Y4C4 1052 aa17.26■□□□□ 0.35
USP39-211ENST00000465282 hCG_1818297A0A087WSY0 165 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 J3KR12 359 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 MFSD11O43934 449 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 MAFKO60675 156 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 ZNF821O75541 412 aaPredicted RBP17.25■□□□□ 0.35
USP39-211ENST00000465282 TMCC1O94876 653 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 FTCDO95954 541 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 ADH1BP00325 375 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 GSRP00390 522 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 ACADMP11310 421 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 TGM2P21980 687 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 GARSP41250 739 aaKnown RBP17.25■□□□□ 0.35
USP39-211ENST00000465282 RPS14P62263 151 aaKnown RBP17.25■□□□□ 0.35
USP39-211ENST00000465282 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
USP39-211ENST00000465282 CARD16Q5EG05 197 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 FAM46CQ5VWP2 391 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 Q6ZVU0 165 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 PLD5Q8N7P1 536 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 OR2A12Q8NGT7 310 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 NSMCE1Q8WV22 266 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 GAB3Q8WWW8 586 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 LRIG1Q96JA1 1093 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 SPACA7Q96KW9 195 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 FAM129BQ96TA1 746 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 ITM2CQ9NQX7 267 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 HAUS2Q9NVX0 235 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 DTLQ9NZJ0 730 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 SPAG17Q6Q759 2223 aa17.25■□□□□ 0.35
USP39-211ENST00000465282 CST8O60676 142 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 IGLV3-19P01714 112 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 DNTTP04053 509 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 PRNPP04156 253 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 CCNCP24863 283 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 OXTRP30559 389 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 HSPA9P38646 679 aaKnown RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 RAD51Q06609 339 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 NSUN2Q08J23 767 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP39-211ENST00000465282 DMWDQ09019 674 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 PDK1Q15118 436 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 CST6Q15828 149 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 MEI1Q5TIA1 1274 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 KIAA1324Q6UXG2 1013 aaKnown RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 REXO1L1PQ8IX06 675 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 STK40Q8N2I9 435 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 BBS5Q8N3I7 341 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 TMIEQ8NEW7 156 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 OR2AP1Q8NGE2 309 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 ALG3Q92685 438 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 ATOH1Q92858 354 aaPredicted RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 HDAC11Q96DB2 347 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 MTG2Q9H4K7 406 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 USP36Q9P275 1121 aaKnown RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 FCF1Q9Y324 198 aaKnown RBP17.24■□□□□ 0.35
USP39-211ENST00000465282 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
USP39-211ENST00000465282 C1QTNF3-AMACRE9PGA6 284 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
USP39-211ENST00000465282 DDX3YO15523 660 aaKnown RBP17.23■□□□□ 0.35
USP39-211ENST00000465282 RPP40O75818 363 aaKnown RBP17.23■□□□□ 0.35
USP39-211ENST00000465282 TJP3O95049 919 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 POP4O95707 220 aaKnown RBP17.23■□□□□ 0.35
USP39-211ENST00000465282 IGSF6O95976 241 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 VAV1P15498 845 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 C5AR1P21730 350 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 P2RY2P41231 377 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 NBL1P41271 181 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 CSNK1DP48730 415 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 RENBPP51606 427 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 RHOAP61586 193 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 GBE1Q04446 702 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms