RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PFKPQ01813 784 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 SERINC3Q13530 473 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 SLC12A1Q13621 1099 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 PDK1Q15118 436 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 PLEKHG6Q3KR16 790 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ARHGAP36Q6ZRI8 547 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 B4GALNT4Q76KP1 1039 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ZC3H18Q86VM9 953 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 RNF135Q8IUD6 432 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 PHTF2Q8N3S3 785 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ALLCQ8N6M5 410 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 SLC35B2Q8TB61 432 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ZBTB9Q96C00 473 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 TMEM109Q9BVC6 243 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ACE2Q9BYF1 805 aaPredicted RBP17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 GGA2Q9UJY4 613 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 DNPEPQ9ULA0 475 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 DUSP12Q9UNI6 340 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 SORCS3Q9UPU3 1222 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 NCAM2O15394 837 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 SHOX2O60902 331 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 PABPC1P11940 636 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 ETFBP38117 255 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 ADCY8P40145 1251 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 EIF2DP41214 584 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 GARSP41250 739 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 EIF3EP60228 445 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 GEN1Q17RS7 908 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 IL31Q6EBC2 164 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 ZNF771Q7L3S4 317 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 ADIPOR2Q86V24 386 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 LRRC49Q8IUZ0 686 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 LGMNQ99538 433 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 FBRSL1Q9HCM7 1045 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 ATP13A1Q9HD20 1204 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 CD320Q9NPF0 282 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 IPO11Q9UI26 975 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 VPS28Q9UK41 221 aa17.26■□□□□ 0.35
EXOSC3-203ENST00000465229 SPECC1L-ADORA2AF8WAN1 911 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 MCF2LO15068 1137 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 MAFKO60675 156 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 RBP3P10745 1247 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 GLDCP23378 1020 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 CTHP32929 405 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 LMAN1P49257 510 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 GALK1P51570 392 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 XRCC4Q13426 336 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 SLC44A4Q53GD3 710 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 PITRM1Q5JRX3 1037 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 TMEM215Q68D42 235 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 GRAMD4Q6IC98 578 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 TXNDC11Q6PKC3 985 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 HOOK3Q86VS8 718 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ZNF354CQ86Y25 554 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 RELL1Q8IUW5 271 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 GJD3Q8N144 294 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 CCNYQ8ND76 341 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 TSGA13Q96PP4 275 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 C10orf88Q9H8K7 445 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ANAPC5Q9UJX4 755 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ZNF148Q9UQR1 794 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 PIAS3Q9Y6X2 628 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 H7C0C1 242 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 J3KR12 359 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 KDELR3O43731 214 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 SNAP91O60641 907 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ZMPSTE24O75844 475 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ATP5OP48047 213 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ITGA8P53708 1063 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 PPIDQ08752 370 aaKnown RBP17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 KCTD19Q17RG1 926 aaPredicted RBP17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 FUT11Q495W5 492 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 KDM7AQ6ZMT4 941 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 GSTA5Q7RTV2 222 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 RALGPS2Q86X27 583 aaPredicted RBP17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 ATPAF2Q8N5M1 289 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 HDAC11Q96DB2 347 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 BRD8Q9H0E9 1235 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 PCDH9Q9HC56 1237 aa17.25■□□□□ 0.35
EXOSC3-203ENST00000465229 CHD5Q8TDI0 1954 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 TTC28Q96AY4 2481 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 PRRT4C9JH25 899 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 CBX4O00257 560 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 RIPK2O43353 540 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 PRAMEF11O60813 436 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 GLULP15104 373 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 KDSRQ06136 332 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 IFFO1Q0D2I5 559 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 DMC1Q14565 340 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 SFTPA1Q8IWL2 248 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 AHI1Q8N157 1196 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 TERB1Q8NA31 727 aa17.24■□□□□ 0.35
EXOSC3-203ENST00000465229 TFB1MQ8WVM0 346 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms