RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 ZNF670Q9BS34 389 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 LRRC19Q9H756 370 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 DDX56Q9NY93 547 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 MBD1Q9UIS9 605 aaPredicted RBP12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 SCML1Q9UN30 329 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ACTL7AQ9Y615 435 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 ANKRD36A6QL64 1941 aa12.27□□□□□ -0.45
RPUSD3-211ENST00000464783 A0A1W2PP55 124 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 MCF2LO15068 1137 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 ARHGAP6O43182 974 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 RNASEH2AO75792 299 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 C5AR1P21730 350 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 KDELR1P24390 212 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 IFI16Q16666 785 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 ANKRD20A8PQ5CZ79 823 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 CARD16Q5EG05 197 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 PMS2CLQ68D20 193 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 C11orf63Q6NUN7 778 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 DEFB119Q8N690 84 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 TPCN2Q8NHX9 752 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 GRIN3AQ8TCU5 1115 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 CASKIN2Q8WXE0 1202 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 TSC1Q92574 1164 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 RUBCNQ92622 972 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 TOE1Q96GM8 510 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 MAK16Q9BXY0 300 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 TM6SF2Q9BZW4 377 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 LACRTQ9GZZ8 138 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 KLC2Q9H0B6 622 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 FBXL12Q9NXK8 326 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 UBA2Q9UBT2 640 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 IL36AQ9UHA7 158 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 MFHAS1Q9Y4C4 1052 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 ALG6Q9Y672 507 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 DUSP10Q9Y6W6 482 aa12.26□□□□□ -0.45
RPUSD3-211ENST00000464783 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 BTNL10A8MVZ5 291 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 MEI4A8MW99 385 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 J3KR12 359 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 KPNA3O00505 521 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 PJA2O43164 708 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 PSTPIP1O43586 416 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 TMCC1O94876 653 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 PRNPP04156 253 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 RETP07949 1114 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 CHRNA3P32297 505 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ARSEP51690 589 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 CCNHP51946 323 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 RHOAP61586 193 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 SNRPD1P62314 119 aaKnown RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 CREB5Q02930 508 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 POM121L1PQ3SYA9 428 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 LRRC38Q5VT99 294 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 LYSMD4Q5XG99 296 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 AFMIDQ63HM1 303 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 DPY19L3Q6ZPD9 716 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 USP30Q70CQ3 517 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 CYP2U1Q7Z449 544 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 LRRC8AQ8IWT6 810 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ARHGAP12Q8IWW6 846 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 HDDC3Q8N4P3 179 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ATPAF2Q8N5M1 289 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 OR2A12Q8NGT7 310 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 PIP4K2CQ8TBX8 421 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ISG20Q96AZ6 181 aaKnown RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 LOXL4Q96JB6 756 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 GPR174Q9BXC1 333 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ARRDC1-AS1Q9H2J1 176 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 ZDHHC6Q9H6R6 413 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 DYRK4Q9NR20 520 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 WSB2Q9NYS7 404 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 HECAQ9UBI9 543 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 SALL4Q9UJQ4 1053 aa12.25□□□□□ -0.45
RPUSD3-211ENST00000464783 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 KRIT1O00522 736 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 PRAMEF11O60813 436 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 ZNF821O75541 412 aaPredicted RBP12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 PALMO75781 387 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 EPN2O95208 641 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 SEMA4FO95754 770 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 CD160O95971 181 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 IGSF6O95976 241 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 GSRP00390 522 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 IGLV3-19P01714 112 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 IL4RP24394 825 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 ACSL1P33121 698 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 PTGER3P43115 390 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 IL10RBQ08334 325 aa12.24□□□□□ -0.45
RPUSD3-211ENST00000464783 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms