RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OR2A12Q8NGT7 310 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 PCDH19Q8TAB3 1148 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 KIAA1524Q8TCG1 905 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 CASKIN2Q8WXE0 1202 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 ISG20Q96AZ6 181 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 FAF2Q96CS3 445 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 DUSP15Q9H1R2 295 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 TNKS2Q9H2K2 1166 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 CD93Q9NPY3 652 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 TRIM10Q9UDY6 481 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 PLXND1Q9Y4D7 1925 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 FRYLO94915 3013 aa14.79□□□□□ -0.04
SQSTM1-205ENST00000464493 SDK1Q7Z5N4 2213 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 A0A0U1RQJ8 604 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PRR23AA6NEV1 266 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 C3orf70A6NLC5 250 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 J3KR12 359 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 ALOX15BO15296 676 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 MID1O15344 667 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PRAMEF11O60813 436 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 ADH1BP00325 375 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 IGLV3-19P01714 112 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 KRT1P04264 644 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 CD6P30203 668 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 SLC8A1P32418 973 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PSMD8P48556 350 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 CCZ1BP86790 482 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 CCZ1P86791 482 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 ELF2Q15723 593 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 CARD16Q5EG05 197 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 VSIG1Q86XK7 387 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 TP53INP2Q8IXH6 220 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PLPP6Q8IY26 295 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 TOE1Q96GM8 510 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 RNF157Q96PX1 679 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 MAK16Q9BXY0 300 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PDFQ9HBH1 243 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 UBA2Q9UBT2 640 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 IPO11Q9UI26 975 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 PPM1HQ9ULR3 514 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 NCKAP1Q9Y2A7 1128 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 THADAQ6YHU6 1953 aa14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 NYNRINQ9P2P1 1898 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-205ENST00000464493 MACROD2A1Z1Q3 448 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF487B1APH4 448 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 NDUFS2O75306 463 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 TMCC1O94876 653 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 C5AR1P21730 350 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 CHRNA3P32297 505 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 SNRPD1P62314 119 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 RPL6Q02878 288 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 IL10RBQ08334 325 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 GSE1Q14687 1217 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 PAFAH1B3Q15102 231 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 CYTH1Q15438 398 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 SPDYCQ5MJ68 293 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 FAM46CQ5VWP2 391 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 PMS2CLQ68D20 193 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 NCBP2-AS2Q69YL0 99 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 LAIR1Q6GTX8 287 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 DPY19L3Q6ZPD9 716 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 ARHGAP36Q6ZRI8 547 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 USP30Q70CQ3 517 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 ASCL5Q7RTU5 278 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 FAM124AQ86V42 546 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 PQLC3Q8N755 202 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 CHST14Q8NCH0 376 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 TMIEQ8NEW7 156 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 PIP4K2CQ8TBX8 421 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 GANCQ8TET4 914 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 RNF25Q96BH1 459 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 LOXL4Q96JB6 756 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 OMDQ99983 421 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 TM6SF2Q9BZW4 377 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 TSGA10Q9BZW7 698 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 SP110Q9HB58 689 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 FBXL12Q9NXK8 326 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 WSB2Q9NYS7 404 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 HECAQ9UBI9 543 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 IL36AQ9UHA7 158 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 SARDHQ9UL12 918 aa14.77□□□□□ -0.05
SQSTM1-205ENST00000464493 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 A0A1W2PP55 124 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 C1QTNF3-AMACRE9PGA6 284 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 KRT86O43790 486 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 PALMO75781 387 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 ZRANB2O95218 330 aaKnown RBP eCLIP14.76□□□□□ -0.051e-11■■□□□ 13.3
SQSTM1-205ENST00000464493 GSRP00390 522 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 PRNPP04156 253 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 CTSLP07711 333 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 ARSIQ5FYB1 569 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 MFSD7Q6UXD7 560 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 LRRC49Q8IUZ0 686 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 TMEFF1Q8IYR6 380 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 KATNAL2Q8IYT4 538 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms