RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SLC1A1P43005 524 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 SERPINH1P50454 418 aaKnown RBP17.38■□□□□ 0.37
VPS52-215ENST00000464425 METAP1P53582 386 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 SLC25A11Q02978 314 aaKnown RBP17.38■□□□□ 0.37
VPS52-215ENST00000464425 POM121L1PQ3SYA9 428 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 TCEAL6Q6IPX3 200 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 C22orf39Q6P5X5 142 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 PRR23CQ6ZRP0 262 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 HDDC3Q8N4P3 179 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 OR2A12Q8NGT7 310 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 TCEAL3Q969E4 200 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
VPS52-215ENST00000464425 ZNF830Q96NB3 372 aaPredicted RBP17.38■□□□□ 0.37
VPS52-215ENST00000464425 OMDQ99983 421 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 KLC2Q9H0B6 622 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 BTBD1Q9H0C5 482 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 NEUROG2Q9H2A3 272 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 VPS45Q9NRW7 570 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.38■□□□□ 0.37
VPS52-215ENST00000464425 SALL4Q9UJQ4 1053 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 SARDHQ9UL12 918 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 SCML1Q9UN30 329 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 PLXND1Q9Y4D7 1925 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 PATE3B3GLJ2 98 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 PLK4O00444 970 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 MCF2LO15068 1137 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 BUB1O43683 1085 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 KRT86O43790 486 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 ZNF821O75541 412 aaPredicted RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 CD160O95971 181 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 ADH1BP00325 375 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 ERCC2P18074 760 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 C5AR1P21730 350 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 MAOBP27338 520 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 GJC1P36383 396 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 YBEYP58557 167 aaPredicted RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 MESDQ14696 234 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 DPYSL2Q16555 572 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 IFI16Q16666 785 aaKnown RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 DSG4Q86SJ6 1040 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 SYT12Q8IV01 421 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 RGL4Q8IZJ4 473 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 UMODL1-AS1Q8N2C9 162 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 AADATQ8N5Z0 425 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 C12orf50Q8NA57 414 aaPredicted RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 NETO2Q8NC67 525 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 CHST14Q8NCH0 376 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 FOXJ1Q92949 421 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 C6orf106Q9H6K1 298 aaPredicted RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 PILRBQ9UKJ0 227 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 PPM1HQ9ULR3 514 aa17.37■□□□□ 0.37
VPS52-215ENST00000464425 FARP1Q9Y4F1 1045 aaPredicted RBP17.37■□□□□ 0.37
VPS52-215ENST00000464425 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 MEI4A8MW99 385 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 H3BRJ5 948 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 SEMA4FO95754 770 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 AMPD1P23109 780 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 CHRNA3P32297 505 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 ARL4AP40617 200 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 RECQLP46063 649 aaPredicted RBP17.36■□□□□ 0.37
VPS52-215ENST00000464425 HCAR3P49019 387 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 SFSWAPQ12872 951 aaKnown RBP17.36■□□□□ 0.37
VPS52-215ENST00000464425 KRT81Q14533 505 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 HADHQ16836 314 aaKnown RBP17.36■□□□□ 0.37
VPS52-215ENST00000464425 PARP15Q460N3 678 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 ATP13A4Q4VNC1 1196 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 SYCP2LQ5T4T6 812 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 DCAF12L1Q5VU92 463 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 FAM46CQ5VWP2 391 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 C11orf63Q6NUN7 778 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.36■□□□□ 0.37
VPS52-215ENST00000464425 DPY19L3Q6ZPD9 716 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 USP30Q70CQ3 517 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 POLNQ7Z5Q5 900 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 CADM4Q8NFZ8 388 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 TPCN2Q8NHX9 752 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 PIP4K2CQ8TBX8 421 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 TEKT4Q8WW24 435 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 CCDC114Q96M63 670 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 CEP44Q9C0F1 390 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 SLC39A8Q9C0K1 460 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 SGK2Q9HBY8 427 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 DONSONQ9NYP3 566 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
VPS52-215ENST00000464425 A0A0U1RQJ8 604 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 METTL12A8MUP2 240 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 RNF103O00237 685 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 KHNYNO15037 678 aaKnown RBP17.35■□□□□ 0.37
VPS52-215ENST00000464425 ALOX15BO15296 676 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 GDF9O60383 454 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 BUB1BO60566 1050 aaPredicted RBP17.35■□□□□ 0.37
VPS52-215ENST00000464425 CTSLP07711 333 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 ZNF135P52742 658 aaPredicted RBP17.35■□□□□ 0.37
VPS52-215ENST00000464425 NDST2P52849 883 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 GEMIN4P57678 1058 aaKnown RBP17.35■□□□□ 0.37
VPS52-215ENST00000464425 TAS2R40P59535 323 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 LMNB2Q03252 620 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 SERINC3Q13530 473 aa17.35■□□□□ 0.37
VPS52-215ENST00000464425 DPYSQ14117 519 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms