RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NEMP2A6NFY4 417 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 F5H5T6 163 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 LYNP07948 512 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 SERPINF2P08697 491 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 SLC2A4P14672 509 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 RENBPP51606 427 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 SLC7A2P52569 658 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 CHN2P52757 468 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 PGGT1BP53609 377 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 TBX4P57082 545 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 MFSD10Q14728 455 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 PITRM1Q5JRX3 1037 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 DDI1Q8WTU0 396 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 SH3KBP1Q96B97 665 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 MOCOSQ96EN8 888 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 DCUN1D1Q96GG9 259 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 SMARCD1Q96GM5 515 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 PIWIL1Q96J94 861 aaKnown RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 PPP1R10Q96QC0 940 aaKnown RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 SMAD5Q99717 465 aaKnown RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 GATA5Q9BWX5 397 aaPredicted RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 DGCR6LQ9BY27 220 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
HPS4-208ENST00000464362 TRHDEQ9UKU6 1024 aa9.2□□□□□ -0.94
HPS4-208ENST00000464362 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 FAM149AA5PLN7 773 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 PPEF2O14830 753 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 TPD52L2O43399 206 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 CCNT2O60583 730 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 PLIN3O60664 434 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MSCO60682 206 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 DNAJB2P25686 324 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 KLRC2P26717 231 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 EPHX2P34913 555 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ADRA1BP35368 520 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 HSPA13P48723 471 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MPP1Q00013 466 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ZNF177Q13360 481 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 CDH18Q13634 790 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 KRT33BQ14525 404 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 GRM3Q14832 879 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SLC44A4Q53GD3 710 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 LBX2Q6XYB7 198 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 P3H2Q8IVL5 708 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 NAT8LQ8N9F0 302 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 APBB2Q92870 758 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CD101Q93033 1021 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 HDAC10Q969S8 669 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 NXNL1Q96CM4 212 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ERLEC1Q96DZ1 483 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 NSMCE2Q96MF7 247 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SDCBP2Q9H190 292 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ARHGEF4Q9NR80 690 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 NDUFA13Q9P0J0 144 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MAFBQ9Y5Q3 323 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 KANSL1LA0AUZ9 987 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 C16orf96A6NNT2 1141 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ITM2AO43736 263 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CHRNGP07510 517 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 HOXC6P09630 235 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 OR4Q2P0C623 313 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 WEE1P30291 646 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 GPD2P43304 727 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 TRPC1P48995 793 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 NEK3P51956 506 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MRPS5P82675 430 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 SLC5A9Q2M3M2 681 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 RAP1GAP2Q684P5 730 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ANKS6Q68DC2 871 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 TIGD7Q6NT04 549 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 FBXO30Q8TB52 745 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 FAR2Q96K12 515 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 B3GALT6Q96L58 329 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SPON1Q9HCB6 807 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 BPIFA1Q9NP55 256 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 TMEM161AQ9NX61 479 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SLC13A4Q9UKG4 626 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 C15orf38-AP3S2A0A0A6YYH1 394 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SMIM28A0A1B0GU29 152 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 SLC15A5A6NIM6 579 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MDM4O15151 490 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 H2AFYO75367 372 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 TIPRLO75663 272 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CRHR1P34998 444 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 VAC14Q08AM6 782 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 DGCR6Q14129 220 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MAPRE1Q15691 268 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MTX3Q5HYI7 312 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 C6orf52Q5T4I8 152 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ARPINQ7Z6K5 226 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 UNC93AQ86WB7 457 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 DENND6AQ8IWF6 608 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ZNF567Q8N184 647 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms