RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PSMB4P28070 264 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CDC25CP30307 473 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 HOXA9P31269 272 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ETV4P43268 484 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 BNIP1Q12981 228 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 PDZD4Q76G19 769 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ZNF567Q8N184 647 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 NPWQ8N729 165 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CCNYQ8ND76 341 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 C10orf82Q8WW14 230 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 PLD4Q96BZ4 506 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 KLF16Q9BXK1 252 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 VPS11Q9H270 941 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CATSPERBQ9H7T0 1116 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ECT2Q9H8V3 914 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 MPP6Q9NZW5 540 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 DPP7Q9UHL4 492 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 TRANK1O15050 2925 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 NRG2O14511 850 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 KRT37O76014 449 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 STC2O76061 302 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 OLFM2O95897 454 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 GJA1P17302 382 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 SERPINB6P35237 376 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CCNFP41002 786 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 SARNPP82979 210 aaKnown RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CCDC15Q0P6D6 951 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ACBD5Q5T8D3 534 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 NADSYN1Q6IA69 706 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 FBXL22Q6P050 247 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 LRRC8BQ6P9F7 803 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 CHSY1Q86X52 802 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ZNF683Q8IZ20 524 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 MAB21L3Q8N8X9 362 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 PTPRN2Q92932 1015 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 STAMBPL1Q96FJ0 436 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 OXNAD1Q96HP4 312 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 ZFRQ96KR1 1074 aaKnown RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 FAM111AQ96PZ2 611 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 LMAN2LQ9H0V9 348 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 TLE6Q9H808 572 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 DNMT3BQ9UBC3 853 aaKnown RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 SZT2Q5T011 3432 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 KLKB1P03952 638 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 HNRNPA1P09651 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL5A1-205ENST00000464187 IRF1P10914 325 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 PTPN2P17706 415 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 CORO1AP31146 461 aaKnown RBP14.79□□□□□ -0.04
COL5A1-205ENST00000464187 CCR2P41597 374 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 SLC11A2P49281 568 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 BMPR2Q13873 1038 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 STXBP5Q5T5C0 1151 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 CYB5D1Q6P9G0 228 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 DENND1CQ8IV53 801 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 FERMT1Q9BQL6 677 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 KLC4Q9NSK0 619 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 ZDHHC7Q9NXF8 308 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 MOCS1Q9NZB8 636 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 IGSF9Q9P2J2 1179 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 PPARGC1AQ9UBK2 798 aaKnown RBP14.79□□□□□ -0.04
COL5A1-205ENST00000464187 USH1CQ9Y6N9 552 aa14.79□□□□□ -0.04
COL5A1-205ENST00000464187 IGLV3-10A0A075B6K4 115 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 RFXAPO00287 272 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 COPEO14579 308 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 HGSO14964 777 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 ACSL4O60488 711 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 XYLBO75191 536 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 RFPL1O75677 317 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CKMP06732 381 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 RHOP08100 348 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 MGAT1P26572 445 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 NRIP1P48552 1158 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 EPHA5P54756 1037 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CRADDP78560 199 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 SMAD3P84022 425 aaKnown RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 ZXDBP98169 803 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 PARP6Q2NL67 630 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CDHR3Q6ZTQ4 885 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 DEPDC1BQ8WUY9 529 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 IGSF8Q969P0 613 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 TIFAQ96CG3 184 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CELF6Q96J87 481 aaKnown RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 RPRD1AQ96P16 312 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 SRPK1Q96SB4 655 aaKnown RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 GORASP1Q9BQQ3 440 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 ZYG11BQ9C0D3 744 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 MYLK2Q9H1R3 596 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 NDFIP2Q9NV92 336 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 PIH1D1Q9NWS0 290 aaKnown RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CHKBQ9Y259 395 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 RAD54BQ9Y620 910 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CPQQ9Y646 472 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 TNRC18O15417 2968 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CCDC195A0A1B0GUA6 201 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 HMX2A2RU54 273 aa14.78□□□□□ -0.04
COL5A1-205ENST00000464187 CFAP73A6NFT4 308 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms