RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TBC1D7Q9P0N9 293 aa3.91□□□□□ -1.78
SCFD1-204ENST00000463622 STK39Q9UEW8 545 aa3.91□□□□□ -1.78
SCFD1-204ENST00000463622 ANGPTL2Q9UKU9 493 aa3.91□□□□□ -1.78
SCFD1-204ENST00000463622 GINS2Q9Y248 185 aa3.91□□□□□ -1.78
SCFD1-204ENST00000463622 ZFP37Q9Y6Q3 630 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-204ENST00000463622 FRYQ5TBA9 3013 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 IGKV6-21A0A0C4DH24 114 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 FRMD3A2A2Y4 597 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 SHISA7A6NL88 538 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CSDE1O75534 798 aaKnown RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 MBD3O95983 291 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 RETP07949 1114 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 MYBP10242 640 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 OSMP13725 252 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 IBSPP21815 317 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 GLRA2P23416 452 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 KLRC2P26717 231 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 NMT1P30419 496 aaKnown RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 HOXD13P35453 343 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 SOX5P35711 763 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 RPS9P46781 194 aaKnown RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 STK4Q13043 487 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 EMC2Q15006 297 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 NOMO1Q15155 1222 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 MUM1Q2TAK8 710 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 ZC2HC1CQ53FD0 456 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 SLC44A4Q53GD3 710 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 XKR3Q5GH77 459 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CCDC183Q5T5S1 534 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 ATXN7L2Q5T6C5 722 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 N4BP2L1Q5TBK1 243 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 AFMIDQ63HM1 303 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 HAUS3Q68CZ6 603 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 Q6YL49 198 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 MED25Q71SY5 747 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF575Q86XF7 245 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 GPR65Q8IYL9 337 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 AFAP1L2Q8N4X5 818 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 IQUBQ8NA54 791 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 RDM1Q8NG50 284 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CALML4Q96GE6 196 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CEP170P1Q96L14 293 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 TIGD1Q96MW7 591 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 MYOCQ99972 504 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 C7orf25Q9BPX7 421 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 ZSWIM1Q9BR11 485 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 DHX33Q9H6R0 707 aaKnown RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 PRMT8Q9NR22 394 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CHST12Q9NRB3 414 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 CLCA2Q9UQC9 943 aa3.9□□□□□ -1.78
SCFD1-204ENST00000463622 COL1A2P08123 1366 aa3.9□□□□□ -1.79
SCFD1-204ENST00000463622 ZMYM2Q9UBW7 1377 aa3.9□□□□□ -1.79
SCFD1-204ENST00000463622 ZFYVE26Q68DK2 2539 aa3.9□□□□□ -1.79
SCFD1-204ENST00000463622 SPEGQ15772 3267 aa3.9□□□□□ -1.79
SCFD1-204ENST00000463622 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ARHGEF35A5YM69 484 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TRIM49BA6NDI0 452 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MAGEB2O15479 319 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TEX28O15482 410 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 AP5Z1O43299 807 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 OFD1O75665 1012 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PRKD3O94806 890 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 VTNP04004 478 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RPN1P04843 607 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RAP2AP10114 183 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DARSP14868 501 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FPR1P21462 350 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FGFR4P22455 802 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 HSD3B2P26439 372 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SLC11A1P49279 550 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 LIMK1P53667 647 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PER3P56645 1201 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CLRN1P58418 232 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ASIC1P78348 528 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PPP3CAQ08209 521 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DMWDQ09019 674 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CAPSQ13938 189 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MORC3Q14149 939 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZNF572Q7Z3I7 529 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PLXDC1Q8IUK5 500 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ARHGEF19Q8IW93 802 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RNF168Q8IYW5 571 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PQLC1Q8N2U9 271 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 OR7D4Q8NG98 312 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZFP28Q8NHY6 868 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ERMNQ8TAM6 284 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CDK5RAP3Q96JB5 506 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RPS6KC1Q96S38 1066 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ACE2Q9BYF1 805 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RAB34Q9BZG1 259 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 NT5C3AQ9H0P0 336 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 POLR3FQ9H1D9 316 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 HSD3B7Q9H2F3 369 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TNMDQ9H2S6 317 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PLEKHA4Q9H4M7 779 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MINDY3Q9H8M7 445 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 LTB4R2Q9NPC1 389 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MRPL17Q9NRX2 175 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SEMA4GQ9NTN9 838 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ANKEF1Q9NU02 776 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms