RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 NPPBP16860 134 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 HOXB9P17482 250 aaPredicted RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 GNLYP22749 145 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 AKT1P31749 480 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 TM4SF4P48230 202 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 PDLIM4P50479 330 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 FAM3BP58499 235 aaPredicted RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 RBM6P78332 1123 aaKnown RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 CALCRLQ16602 461 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 ZACNQ401N2 412 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 DCAF6Q58WW2 860 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 VWA5B1Q5TIE3 1220 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 KLHL24Q6TFL4 600 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 KSR2Q6VAB6 950 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 PATL1Q86TB9 770 aaKnown RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 NAGSQ8N159 534 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 OR2C3Q8N628 320 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 TMEM217Q8N7C4 229 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 MAB21L3Q8N8X9 362 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 KCNH5Q8NCM2 988 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 LILRB1Q8NHL6 650 aaPredicted RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 CEP76Q8TAP6 659 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 FAM110DQ8TAY7 271 aaPredicted RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 KIAA1191Q96A73 305 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 OTULINQ96BN8 352 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 BICD1Q96G01 975 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 PRPF18Q99633 342 aaKnown RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 SORBS1Q9BX66 1292 aaKnown RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 HIPK3Q9H422 1215 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 CERS4Q9HA82 394 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 DONSONQ9NYP3 566 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 FNIP2Q9P278 1114 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 HERC5Q9UII4 1024 aaKnown RBP2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 NFS1Q9Y697 457 aa2.61□□□□□ -1.99
NDUFA4-202ENST00000463308 FAM172BPA6NC97 362 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 I6L893 689 aaPredicted RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 DHRS4L1P0CG22 281 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 SKIV2L2P42285 1042 aaKnown RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PPP3CCP48454 512 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PMS2P54278 862 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 AK2P54819 239 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 ECT2LQ008S8 904 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 RBM39Q14498 530 aaKnown RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 TBRG1Q3YBR2 411 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PLK5Q496M5 336 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 TMEM268Q5VZI3 342 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PLEKHA7Q6IQ23 1121 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 RETSATQ6NUM9 610 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 SLC30A9Q6PML9 568 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 UNQ6126/PRO20091Q6UXV3 157 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 TMEM200AQ86VY9 491 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 GATAD2AQ86YP4 633 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 WDSUB1Q8N9V3 476 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 CD101Q93033 1021 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 MUL1Q969V5 352 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 ZNF385AQ96PM9 386 aaKnown RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 FRG2BQ96QU4 278 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 STK33Q9BYT3 514 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 ZDHHC7Q9NXF8 308 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 CDH22Q9UJ99 828 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 AGO1Q9UL18 857 aaKnown RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PHTF1Q9UMS5 762 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 PCDHA10Q9Y5I2 948 aa2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 COPG1Q9Y678 874 aaKnown RBP2.6□□□□□ -1.99
NDUFA4-202ENST00000463308 TCRBV7S3A2A0A539 114 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 MAGEA13PA6NCF6 341 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 DHX16O60231 1041 aaKnown RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 ATP1A1P05023 1023 aaKnown RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 NBPF7P0C2Y1 421 aaPredicted RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 ABCB4P21439 1286 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 DGKAP23743 735 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 PRKCHP24723 683 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 RPL3P39023 403 aaKnown RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 PMP22Q01453 160 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 RHAGQ02094 409 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 ZBTB16Q05516 673 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 HLTFQ14527 1009 aaKnown RBP eCLIP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 HNF4GQ14541 408 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 IL31Q6EBC2 164 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 TMC8Q8IU68 726 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 SYTL1Q8IYJ3 562 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 CTCFLQ8NI51 663 aaPredicted RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 MYD88Q99836 296 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 FRMD8Q9BZ67 464 aaPredicted RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 TP63Q9H3D4 680 aaPredicted RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 LIN7CQ9NUP9 197 aaKnown RBP2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 SEL1LQ9UBV2 794 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 BAG5Q9UL15 447 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 DHDHQ9UQ10 334 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 TCF19Q9Y242 345 aa2.59□□□□□ -1.99
NDUFA4-202ENST00000463308 A0A096LPK6 155 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A18PA6NE21 464 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A16PA6NEW6 464 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 AGAP5A6NIR3 686 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 AQP12BA6NM10 295 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A9PA6NNJ1 464 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 SLC38A8A6NNN8 435 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 EFCAB8A8MWE9 144 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A5PA8MXJ8 464 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms