RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 POLR1BQ9H9Y6 1135 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 DNAJC28Q9NX36 388 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 NLGN3Q9NZ94 848 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 VPS51Q9UID3 782 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 PNMA8BQ9ULN7 279 aaPredicted RBP16.06■□□□□ 0.16
SND1-203ENST00000463020 HS3ST2Q9Y278 367 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 ACTL7AQ9Y615 435 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 UBR5O95071 2799 aaPredicted RBP16.06■□□□□ 0.16
SND1-203ENST00000463020 A0A0D9SEW6 157 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 FAM170AA1A519 330 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 BECN2A8MW95 431 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 SCAMP1O15126 338 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 SPINT1O43278 529 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 PAGE1O75459 146 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 ENDOD1O94919 500 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 HNRNPA2B1P22626 353 aaKnown RBP16.05■□□□□ 0.16
SND1-203ENST00000463020 SKOR1P84550 965 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 NME3Q13232 169 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 CDKN3Q16667 212 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 ISXQ2M1V0 245 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 TTC39BQ5VTQ0 682 aaPredicted RBP16.05■□□□□ 0.16
SND1-203ENST00000463020 FAM183BPQ6ZVS7 135 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 PTAR1Q7Z6K3 402 aaPredicted RBP16.05■□□□□ 0.16
SND1-203ENST00000463020 PASD1Q8IV76 773 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 ZNF548Q8NEK5 533 aaPredicted RBP16.05■□□□□ 0.16
SND1-203ENST00000463020 MAPK15Q8TD08 544 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 TCEAL2Q9H3H9 227 aaPredicted RBP16.05■□□□□ 0.16
SND1-203ENST00000463020 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 TBC1D30Q9Y2I9 924 aa16.05■□□□□ 0.16
SND1-203ENST00000463020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.04■□□□□ 0.16
SND1-203ENST00000463020 THAP12O43422 761 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ADCY5O95622 1261 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ERBB2P04626 1255 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 CCR1P32246 355 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 PDX1P52945 283 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 RHDQ02161 417 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ZNF177Q13360 481 aaPredicted RBP16.04■□□□□ 0.16
SND1-203ENST00000463020 C5orf22Q49AR2 442 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 PERM1Q5SV97 790 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 OLFML1Q6UWY5 402 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 TRIM59Q8IWR1 403 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 ATP11CQ8NB49 1132 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
SND1-203ENST00000463020 RNF34Q969K3 372 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 VOPP1Q96AW1 172 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 PPP1R9BQ96SB3 815 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 GTPBP4Q9BZE4 634 aaKnown RBP16.04■□□□□ 0.16
SND1-203ENST00000463020 MUC3BQ9H195 1237 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 PIGVQ9NUD9 493 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 GGT7Q9UJ14 662 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
SND1-203ENST00000463020 ENTPD2Q9Y5L3 495 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
SND1-203ENST00000463020 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 LZTS3O60299 673 aaPredicted RBP16.03■□□□□ 0.16
SND1-203ENST00000463020 LEFTY1O75610 366 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 PCDH8O95206 1070 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 GP1BAP07359 652 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 GNA15P30679 374 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 AKT2P31751 481 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 CDK17Q00537 523 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 VAC14Q08AM6 782 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
SND1-203ENST00000463020 DEFB133Q30KQ1 61 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 BROXQ5VW32 411 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 C22orf39Q6P5X5 142 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 DPY19L3Q6ZPD9 716 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
SND1-203ENST00000463020 EFL1Q7Z2Z2 1120 aaKnown RBP16.03■□□□□ 0.16
SND1-203ENST00000463020 RBFAQ8N0V3 343 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 TMIEQ8NEW7 156 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 MED15Q96RN5 788 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 SIK2Q9H0K1 926 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 UBE2TQ9NPD8 197 aaPredicted RBP16.03■□□□□ 0.16
SND1-203ENST00000463020 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 MAN1B1Q9UKM7 699 aa16.03■□□□□ 0.16
SND1-203ENST00000463020 CPED1A4D0V7 1026 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 PPP1R3GB7ZBB8 358 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 B8ZZF3 427 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 P4HA2O15460 535 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 EFSO43281 561 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 PAK4O96013 591 aaPredicted RBP16.02■□□□□ 0.16
SND1-203ENST00000463020 C6P13671 934 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 NME1P15531 152 aaKnown RBP16.02■□□□□ 0.16
SND1-203ENST00000463020 SRSF6Q13247 344 aaKnown RBP16.02■□□□□ 0.16
SND1-203ENST00000463020 NEK5Q6P3R8 708 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 NYAP1Q6ZVC0 841 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 TFAP2DQ7Z6R9 452 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 C1orf131Q8NDD1 294 aaKnown RBP16.02■□□□□ 0.16
SND1-203ENST00000463020 OR7D4Q8NG98 312 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 SMARCE1Q969G3 411 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 WBP1Q96G27 269 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 SLC46A1Q96NT5 459 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms