RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 LRRC31Q6UY01 552 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 GCNT7Q6ZNI0 430 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 DPY19L3Q6ZPD9 716 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 ERN2Q76MJ5 926 aaKnown RBP16.46■□□□□ 0.23
COL7A1-204ENST00000462475 OR13H1Q8NG92 308 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 RFFLQ8WZ73 363 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 C18orf8Q96DM3 657 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 CALN1Q9BXU9 219 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 DYRK4Q9NR20 520 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 ZNF212Q9UDV6 495 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 AK5Q9Y6K8 562 aa16.46■□□□□ 0.23
COL7A1-204ENST00000462475 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-204ENST00000462475 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 FFAR2O15552 330 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 SRGAP2O75044 1071 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-204ENST00000462475 LEFTY1O75610 366 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 ZMPSTE24O75844 475 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 F9P00740 461 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 HNRNPA2B1P22626 353 aaKnown RBP16.45■□□□□ 0.22
COL7A1-204ENST00000462475 DGKAP23743 735 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 AKT2P31751 481 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 CLDN2P57739 230 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 RTP5Q14D33 572 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 BNIPLQ7Z465 357 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 NOP9Q86U38 636 aaKnown RBP16.45■□□□□ 0.22
COL7A1-204ENST00000462475 ERICH1Q86X53 443 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 SLC22A18ASQ8N1D0 253 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 C1orf74Q96LT6 269 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 CFAP57Q96MR6 1250 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 HDAC8Q9BY41 377 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 NRSN2Q9GZP1 204 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 KLHL11Q9NVR0 708 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 IL36AQ9UHA7 158 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 CLCA2Q9UQC9 943 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
COL7A1-204ENST00000462475 DOCK9Q9BZ29 2069 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 PCDH8O95206 1070 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 SERPINH1P50454 418 aaKnown RBP16.44■□□□□ 0.22
COL7A1-204ENST00000462475 ARF5P84085 180 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-204ENST00000462475 TMEM259Q4ZIN3 620 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 KLHDC7AQ5VTJ3 777 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 FAM131BQ86XD5 332 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 FAM114A1Q8IWE2 563 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 DCBLD1Q8N8Z6 715 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 OR4C6Q8NH72 309 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 SPON2Q9BUD6 331 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 NAA15Q9BXJ9 866 aaKnown RBP16.44■□□□□ 0.22
COL7A1-204ENST00000462475 ATP13A1Q9HD20 1204 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 TMEM59LQ9UK28 342 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 ACTL7AQ9Y615 435 aa16.44■□□□□ 0.22
COL7A1-204ENST00000462475 BRINP1O60477 761 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 PIAS2O75928 621 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 MMEP08473 750 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 GIMD1P0DJR0 217 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 EIF2S3P41091 472 aaKnown RBP16.43■□□□□ 0.22
COL7A1-204ENST00000462475 RECQLP46063 649 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-204ENST00000462475 DAB2P98082 770 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 FGL2Q14314 439 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 ABI3BPQ7Z7G0 1075 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 PPP1R16AQ96I34 528 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 HAPLN3Q96S86 360 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 ZYG11BQ9C0D3 744 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
COL7A1-204ENST00000462475 FCF1Q9Y324 198 aaKnown RBP16.43■□□□□ 0.22
COL7A1-204ENST00000462475 F8VZ95 297 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 LSM8O95777 96 aaKnown RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 MYF5P13349 255 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 ADRB3P13945 408 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 UCHL3P15374 230 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 ITGB7P26010 798 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 NEK3P51956 506 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 NOMO3P69849 1222 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 GNA12Q03113 381 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 ZNF542PQ5EBM4 170 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 ACBD5Q5T8D3 534 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 NAA35Q5VZE5 725 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 RETSATQ6NUM9 610 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 ZNF783Q6ZMS7 281 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 KDM7AQ6ZMT4 941 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 TMC6Q7Z403 805 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 PTAR1Q7Z6K3 402 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 EMC1Q8N766 993 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
COL7A1-204ENST00000462475 CPA5Q8WXQ8 436 aa16.42■□□□□ 0.22
COL7A1-204ENST00000462475 CEP44Q9C0F1 390 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms