RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 POLD2P49005 469 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 MTA1Q13330 715 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 EIF4A2Q14240 407 aaKnown RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 KRT32Q14532 448 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 SLC18A3Q16572 532 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 PLK5Q496M5 336 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 MTX3Q5HYI7 312 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 SH2D4BQ5SQS7 431 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 B4GALNT4Q76KP1 1039 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 FASTKD5Q7L8L6 764 aaKnown RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 TFAP2DQ7Z6R9 452 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 UBE2Q1Q7Z7E8 422 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 CHSY1Q86X52 802 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 RPAP2Q8IXW5 612 aaPredicted RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 DIS3L2Q8IYB7 885 aaKnown RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 GHDCQ8N2G8 530 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 SCAIQ8N9R8 606 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 PNLDC1Q8NA58 520 aaKnown RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 FAM110DQ8TAY7 271 aaPredicted RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 METTL6Q8TCB7 284 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 KIF1BPQ96EK5 621 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 CHCHD6Q9BRQ6 235 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.09□□□□□ -1.75
CLK1-206ENST00000461326 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.09□□□□□ -1.75
CLK1-206ENST00000461326 LMAN2LQ9H0V9 348 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 SLC25A18Q9H1K4 315 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 TLR8Q9NR97 1041 aaKnown RBP4.09□□□□□ -1.75
CLK1-206ENST00000461326 DIAPH3Q9NSV4 1193 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 FLRT1Q9NZU1 646 aa4.09□□□□□ -1.75
CLK1-206ENST00000461326 SEC14L2O76054 403 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 ACADMP11310 421 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 ARL3P36405 182 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CYP2J2P51589 502 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 RARSP54136 660 aaKnown RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 RPL7AP62424 266 aaKnown RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 EFNB1P98172 346 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 SETQ01105 290 aaPredicted RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 SLC10A2Q12908 348 aaPredicted RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 GALNT3Q14435 633 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 AP5B1Q2VPB7 878 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 ITPRIPL1Q6GPH6 555 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 C11orf87Q6NUJ2 197 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CFAP161Q6P656 301 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CYB5R4Q7L1T6 521 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 RNF144BQ7Z419 303 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 IGFN1Q86VF2 1251 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CPXM2Q8N436 756 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 NGEFQ8N5V2 710 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 ANKRD52Q8NB46 1076 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 SETD9Q8NE22 299 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 SEMA6DQ8NFY4 1073 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 OSR1Q8TAX0 266 aaPredicted RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 HDAC7Q8WUI4 952 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 SNRNP27Q8WVK2 155 aaKnown RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 HSPH1Q92598 858 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CUL5Q93034 780 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CLSTN3Q9BQT9 956 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 TMX4Q9H1E5 349 aaPredicted RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 RANBP17Q9H2T7 1088 aaKnown RBP4.08□□□□□ -1.76
CLK1-206ENST00000461326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.08□□□□□ -1.76
CLK1-206ENST00000461326 GRHL1Q9NZI5 618 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 IL1RAPL1Q9NZN1 696 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 CAMK2AQ9UQM7 478 aa4.08□□□□□ -1.76
CLK1-206ENST00000461326 TEX13CA0A0J9YWL9 993 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 FSD2A1L4K1 749 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 DPPA5A6NC42 116 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 C17orf100A8MU93 164 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 TP73O15350 636 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 CEP104O60308 925 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 SERPINC1P01008 464 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 URODP06132 367 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 UBL4AP11441 157 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 FCGR2AP12318 317 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 LAMP2P13473 410 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ST6GAL1P15907 406 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 CDH2P19022 906 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 HOXA7P31268 230 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 UFM1P61960 85 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 YWHAZP63104 245 aaKnown RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 MAMLD1Q13495 774 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 FHL1Q13642 323 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ZNF268Q14587 947 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 RPE65Q16518 533 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 AWAT1Q58HT5 328 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ARL13AQ5H913 290 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 KIAA1755Q5JYT7 1200 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 GPATCH4Q5T3I0 446 aaKnown RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 TMEM268Q5VZI3 342 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 HAUS3Q68CZ6 603 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ISM2Q6H9L7 571 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 TMEM81Q6P7N7 255 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 C17orf99Q6UX52 265 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 IL20RBQ6UXL0 311 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 CPLX4Q7Z7G2 160 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 FAM185AQ8N0U4 392 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 C8orf58Q8NAV2 365 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 DNAAF1Q8NEP3 725 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms