RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GPAT3Q53EU6 434 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 OAFQ86UD1 273 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SLC47A2Q86VL8 602 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 FBXW8Q8N3Y1 598 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF540Q8NDQ6 660 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 TSPAN14Q8NG11 270 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 NEK7Q8TDX7 302 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SEMA4DQ92854 862 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 DGCR14Q96DF8 476 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF354BQ96LW1 612 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PLEKHG4BQ96PX9 1271 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 POLR1EQ9GZS1 481 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SUCOQ9UBS9 1254 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PFDN2Q9UHV9 154 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 FARP2O94887 1054 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 AXLP30530 894 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MMP13P45452 471 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RPS6KA3P51812 740 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ARFIP1P53367 373 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 LGI2Q8N0V4 545 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ABCB10Q9NRK6 738 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 KLQ9UEF7 1012 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 OR10H1Q9Y4A9 318 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PGRMC2O15173 223 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ADCY6O43306 1168 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SLC37A4O43826 429 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PIGNO95427 931 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 IFNGP01579 166 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 APOC1P02654 83 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 VTNP04004 478 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PROCP04070 461 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 C4orf19Q8IY42 314 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ADGRG2Q8IZP9 1017 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 PHF10Q8WUB8 498 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RHBGQ9H310 441 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RAPGEFL1Q9UHV5 662 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 TSPAN16Q9UKR8 245 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 DNPEPQ9ULA0 475 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 TNS3Q68CZ2 1445 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 FAM25EA8MYX2 175 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SPTLC1O15269 473 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TSPAN3O60637 253 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PAEPP09466 180 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 DBTP11182 482 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SREBF1P36956 1147 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 THOP1P52888 689 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 VBP1P61758 197 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MRPS22P82650 360 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ADIGQ0VDE8 80 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF571Q7Z3V5 609 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TFAP2DQ7Z6R9 452 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZC3H7AQ8IWR0 971 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ENGASEQ8NFI3 743 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CXorf40AQ8TE69 158 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SEMA4AQ9H3S1 761 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SOHLH2Q9NX45 425 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CCDC59Q9P031 241 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 STOML2Q9UJZ1 356 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 KIF1BO60333 1816 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ASTN2O75129 1339 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 FGF10O15520 208 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 OR10H2O60403 315 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TCEA3O75764 348 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF37AP17032 561 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CHRNA5P30532 468 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MAPK8P45983 427 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 AKR1D1P51857 326 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PARP6Q2NL67 630 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 STYK1Q6J9G0 422 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ATG14Q6ZNE5 492 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 HPS6Q86YV9 775 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TRAPPC5Q8IUR0 188 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 KLHL23Q8NBE8 558 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TAS1R2Q8TE23 839 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TEFMQ96QE5 360 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 FNDC11Q9BVV2 318 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 WDR12Q9GZL7 423 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 LMAN2LQ9H0V9 348 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 XPNPEP3Q9NQH7 507 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MORF4L1Q9UBU8 362 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 GGA2Q9UJY4 613 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ST3GAL5Q9UNP4 418 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TRIM38O00635 465 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 GCATO75600 419 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CELF2O95319 508 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SNRPB2P08579 225 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 NR2F1P10589 423 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ANTXR2P58335 489 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 RGS1Q08116 209 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms