RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FKBP1BP68106 108 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 CST9Q5W186 159 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 RGMBQ6NW40 437 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 TAC4Q86UU9 113 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 KCNMB4Q86W47 210 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 SMYD1Q8NB12 490 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 EBF4Q9BQW3 602 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 CHST12Q9NRB3 414 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PTTG2Q9NZH5 202 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PACSIN3Q9UKS6 424 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 NT5C1B-RDH14C9J2C7 533 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 ZMPSTE24O75844 475 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PTPN3P26045 913 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 BTKQ06187 659 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 AGMOQ6ZNB7 445 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PAQR9Q6ZVX9 377 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 HSPBAP1Q96EW2 488 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 ABHD8Q96I13 439 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PNPOQ9NVS9 261 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 CDH9Q9ULB4 789 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 SLC27A5Q9Y2P5 690 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 COMMD10Q9Y6G5 202 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
LMNB1-203ENST00000460265 GLRA3O75311 464 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 RFPL1O75677 317 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 SOAT2O75908 522 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 DGKIO75912 1065 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 ASPHQ12797 758 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 PCBP1Q15365 356 aaKnown RBP eCLIP15.66■□□□□ 0.11e-18■□□□□ 8.3
LMNB1-203ENST00000460265 PNPLA1Q8N8W4 532 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 TMEM216Q9P0N5 145 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 DUSP11O75319 330 aaKnown RBP15.65■□□□□ 0.1
LMNB1-203ENST00000460265 TPSB2P20231 275 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 SERPINB8P50452 374 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 FCGRTP55899 365 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 SEMA5AQ13591 1074 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 TPSAB1Q15661 275 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 TMEM86AQ8N2M4 240 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 DQX1Q8TE96 717 aaKnown RBP15.65■□□□□ 0.1
LMNB1-203ENST00000460265 CLPTM1LQ96KA5 538 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 ATP6V1B1P15313 513 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 SPOUT1Q5T280 376 aaKnown RBP15.65■□□□□ 0.1
LMNB1-203ENST00000460265 BHMTQ93088 406 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 PPP1R14BQ96C90 147 aa15.65■□□□□ 0.1
LMNB1-203ENST00000460265 FCRL2Q96LA5 508 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-203ENST00000460265 CHRNA1P02708 482 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 ITGB1P05556 798 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.1
LMNB1-203ENST00000460265 GRK4P32298 578 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 NAPEPLDQ6IQ20 393 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 ALKAL1Q6UXT8 129 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 ARHGAP36Q6ZRI8 547 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 ACAD11Q709F0 780 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 PDCD6IPQ8WUM4 868 aaKnown RBP15.64■□□□□ 0.1
LMNB1-203ENST00000460265 SOCS4Q8WXH5 440 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 OMDQ99983 421 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 NAT9Q9BTE0 207 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 CYP4F12Q9HCS2 524 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 NT5MQ9NPB1 228 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 DCDC2Q9UHG0 476 aa15.64■□□□□ 0.1
LMNB1-203ENST00000460265 RUVBL2Q9Y230 463 aaKnown RBP15.64■□□□□ 0.1
LMNB1-203ENST00000460265 TTC24A2A3L6 582 aaPredicted RBP15.64■□□□□ 0.09
LMNB1-203ENST00000460265 BPGMP07738 259 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 MTTPP55157 894 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 PDE1CQ14123 709 aaPredicted RBP15.64■□□□□ 0.09
LMNB1-203ENST00000460265 C10orf120Q5SQS8 335 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 NPWQ8N729 165 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 ELMO2Q96JJ3 720 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 SP110Q9HB58 689 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 SNX15Q9NRS6 342 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 GTF2IRD1Q9UHL9 959 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 FBXW11Q9UKB1 542 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 SLC45A1Q9Y2W3 748 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 MYO7AQ13402 2215 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 PRR5-ARHGAP8B1AHC4 643 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 ITM2AO43736 263 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 TSHRP16473 764 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 CCR1P32246 355 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 PBX3P40426 434 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 ARHGAP8P85298 464 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 PRKCZQ05513 592 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 SULT2A1Q06520 285 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 TEX44Q53QW1 395 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 OR6Y1Q8NGX8 325 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF778Q96MU6 729 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 KLHL5Q96PQ7 755 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 TMEM30AQ9NV96 361 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 THAP1Q9NVV9 213 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 GTSE1Q9NYZ3 720 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 TSR3Q9UJK0 312 aaKnown RBP15.64■□□□□ 0.09
LMNB1-203ENST00000460265 LRFN2Q9ULH4 789 aa15.64■□□□□ 0.09
LMNB1-203ENST00000460265 CCL22O00626 93 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PAGE1O75459 146 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 TBX18O95935 607 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 CLPTM1O96005 669 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 MT-CO1P00395 513 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 GRIA2P42262 883 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms