RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ADAM7Q9H2U9 754 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 CCSER2Q9H7U1 834 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 USP29Q9HBJ7 922 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 TBCCD1Q9NVR7 557 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 PLAAQ9Y263 795 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 MAP3K7O43318 606 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 LINC00271P0C7V0 271 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 POLE2P56282 527 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 AP1B1Q10567 949 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 MORF4L2Q15014 288 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 PAFAH1B3Q15102 231 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 PDK1Q15118 436 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 UAP1Q16222 522 aaPredicted RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 IQCKQ8N0W5 287 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 PHOSPHO2Q8TCD6 241 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 OLFM3Q96PB7 478 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.72
HERC4-207ENST00000460168 CDK5RAP1Q96SZ6 601 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 LGMNQ99538 433 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 TXLNGYQ9BZA5 131 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 GBA3Q9H227 469 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 POLMQ9NP87 494 aaPredicted RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 DNAJC17Q9NVM6 304 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 FNIP2Q9P278 1114 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 PAK5Q9P286 719 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 FAM32AQ9Y421 112 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 SLC12A8A0AV02 714 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 LCHNA4D1U4 455 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 KCNU1A8MYU2 1149 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 HACD1B0YJ81 288 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 AGPSO00116 658 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 HMBSP08397 361 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CNPP09543 421 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 ZDHHC11BP0C7U3 371 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 GLULP15104 373 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CTNNB1P35222 781 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CHKAP35790 457 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 TWF1Q12792 350 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 SNX32Q86XE0 403 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PPIL6Q8IXY8 311 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SPARTQ8N0X7 666 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 BRSK1Q8TDC3 778 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 OVCA2Q8WZ82 227 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SLC39A13Q96H72 371 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PABPC3Q9H361 631 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 PFDN4Q9NQP4 134 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ENTPD7Q9NQZ7 604 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SHOC2Q9UQ13 582 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ARPC4-TTLL3A0A0A6YYG9 625 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SPATA31D3P0C874 917 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ATP5C1P36542 298 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 EPHB3P54753 998 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PLD1Q13393 1074 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 SPCS2Q15005 226 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 TRIP4Q15650 581 aaPredicted RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 FAM182AQ5T1J6 154 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 DENND2CQ68D51 928 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ZNF449Q6P9G9 518 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CAPN12Q6ZSI9 719 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 SPATA31D4Q6ZUB0 917 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ZCCHC9Q8N567 271 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 HTR3CQ8WXA8 447 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CPT1BQ92523 772 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CDKL2Q92772 493 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 GLMNQ92990 594 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 AZIN2Q96A70 460 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 RTP4Q96DX8 246 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 VPS50Q96JG6 964 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PWWP2AQ96N64 755 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 RBM15Q96T37 977 aaKnown RBP eCLIP10.57□□□□□ -0.72
HERC4-207ENST00000460168 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PRDM12Q9H4Q4 367 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 CATSPERBQ9H7T0 1116 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ALG13Q9NP73 1137 aaKnown RBP10.57□□□□□ -0.72
HERC4-207ENST00000460168 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 TRPM5Q9NZQ8 1165 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 ATPIF1Q9UII2 106 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 INSL5Q9Y5Q6 135 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 HS3ST4Q9Y661 456 aa10.57□□□□□ -0.72
HERC4-207ENST00000460168 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 E9PAM4 449 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 MUSKO15146 869 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 NCAM2O15394 837 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 MAP3K13O43283 966 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 LILRB3O75022 631 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 CXCL14O95715 111 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SYF2O95926 243 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 ADH1AP07327 375 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 HMGA1P17096 107 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms