RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	MCF2L	O15068	1137 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	MID1	O15344	667 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PSTPIP1	O43586	416 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	BNIP3L	O60238	219 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	MAFK	O60675	156 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	IPO7	O95373	1038 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CNR2	P34972	360 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ETFB	P38117	255 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CDKN2B	P42772	138 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PSMD8	P48556	350 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PEX5	P50542	639 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CLCN6	P51797	869 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLC20A2	Q08357	652 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ELAVL3	Q14576	367 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	E2F5	Q15329	346 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CST6	Q15828	149 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	POM121L1P	Q3SYA9	428 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	USP39	Q53GS9	565 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PMS2CL	Q68D20	193 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF776	Q68DI1	518 aa	Predicted RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLC9A4	Q6AI14	798 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	TMCO3	Q6UWJ1	677 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	NPNT	Q6UXI9	565 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PRR23B	Q6ZRT6	265 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	DAAM2	Q86T65	1068 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	NT5DC3	Q86UY8	548 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	FAM124A	Q86V42	546 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLC41A1	Q8IVJ1	513 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	DEFB119	Q8N690	84 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PCDH20	Q8N6Y1	951 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CCDC112	Q8NEF3	446 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	OR6K2	Q8NGY2	324 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PRCC	Q92733	491 aa	Predicted RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	NKD2	Q969F2	451 aa	Predicted RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	FAM131C	Q96AQ9	280 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ARRDC3	Q96B67	414 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZC3H10	Q96K80	434 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	CEP44	Q9C0F1	390 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PABPC3	Q9H361	631 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	FBRS	Q9HAH7	460 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	WSB2	Q9NYS7	404 aa	Predicted RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	IPO11	Q9UI26	975 aa	Known RBP	10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	PPM1H	Q9ULR3	514 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLCO1B1	Q9Y6L6	691 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	OTOGL	Q3ZCN5	2332 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	ARHGAP42	A6NI28	874 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	INSIG1	O15503	277 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PALM	O75781	387 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	FTCD	O95954	541 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	KRT10	P13645	584 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	TGM1	P22735	817 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CTNNA2	P26232	953 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CHRNA3	P32297	505 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLC8A1	P32418	973 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	ACSL1	P33121	698 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CTNNA1	P35221	906 aa	Known RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	NNMT	P40261	264 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PTGER3	P43115	390 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CCNH	P51946	323 aa	Predicted RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	SLC10A7	Q0GE19	358 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	GALNT2	Q10471	571 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	KIF5A	Q12840	1032 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	IHH	Q14623	411 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	GSE1	Q14687	1217 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CARD16	Q5EG05	197 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	AADACL2	Q6P093	401 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	SPOCD1	Q6ZMY3	1216 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	CEP68	Q76N32	757 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF354C	Q86Y25	554 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	TMEFF1	Q8IYR6	380 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	KATNAL2	Q8IYT4	538 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PGBD5	Q8N414	524 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	DCLK2	Q8N568	766 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	LZTR1	Q8N653	840 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PIP4K2C	Q8TBX8	421 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	GRIN3A	Q8TCU5	1115 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	OR8D1	Q8WZ84	308 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	ISG20	Q96AZ6	181 aa	Known RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	TOE1	Q96GM8	510 aa	Known RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	EXOC2	Q96KP1	924 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	DTL	Q9NZJ0	730 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	UBA2	Q9UBT2	640 aa	Predicted RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PCDHA3	Q9Y5H8	950 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	PLXND1	Q9Y4D7	1925 aa		10.44	□□□□□ -0.74
MRPL55-223	ENST00000459783	hCG_1818297	A0A087WSY0	165 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783		A0A1W2PP55	124 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	TTC24	A2A3L6	582 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ALOX15B	O15296	676 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	DDX3Y	O15523	660 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	SPINT1	O43278	529 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF217	O75362	1048 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	GSR	P00390	522 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	IL1B	P01584	269 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	LMNA	P02545	664 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	PECAM1	P16284	738 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	CD6	P30203	668 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	DNA2	P51530	1060 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms