RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 OR2A12Q8NGT7 310 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 PIP4K2CQ8TBX8 421 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 PPP1R16AQ96I34 528 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 LRIG1Q96JA1 1093 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 CALR3Q96L12 384 aaKnown RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 HEPHQ9BQS7 1158 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 NEUROG2Q9H2A3 272 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 PARD6AQ9NPB6 346 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 CD93Q9NPY3 652 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 EVLQ9UI08 416 aaPredicted RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 GPR179Q6PRD1 2367 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 OTOGLQ3ZCN5 2332 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 A0A1W2PP55 124 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 ITPKAP23677 461 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 ACSL1P33121 698 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 CDH6P55285 790 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 SLC25A11Q02978 314 aaKnown RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 MESDQ14696 234 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 ZFYVE27Q5T4F4 411 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 POLNQ7Z5Q5 900 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 SLC41A1Q8IVJ1 513 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 RYBPQ8N488 228 aaPredicted RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 DNASE2BQ8WZ79 361 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 HMCESQ96FZ2 354 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 NOL6Q9H6R4 1146 aaKnown RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 LRRC19Q9H756 370 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 OSGEPQ9NPF4 335 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 IL36AQ9UHA7 158 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 SLC6A14Q9UN76 642 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
CD28-203ENST00000458610 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 EP300Q09472 2414 aaPredicted RBP16.46■□□□□ 0.23
CD28-203ENST00000458610 MUC22E2RYF6 1773 aaPredicted RBP16.46■□□□□ 0.22
CD28-203ENST00000458610 EML5Q05BV3 1969 aa16.46■□□□□ 0.22
CD28-203ENST00000458610 TMEM110-MUSTN1A8MSY1 372 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 POP4O95707 220 aaKnown RBP16.45■□□□□ 0.22
CD28-203ENST00000458610 GSRP00390 522 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 SERPINB6P35237 376 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 NOP2P46087 812 aaKnown RBP16.45■□□□□ 0.22
CD28-203ENST00000458610 DPYSQ14117 519 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 ODF2Q5BJF6 829 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 TMCO4Q5TGY1 634 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 DCAF12L1Q5VU92 463 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 PEAR1Q5VY43 1037 aaPredicted RBP16.45■□□□□ 0.22
CD28-203ENST00000458610 DPY19L3Q6ZPD9 716 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 TXLNBQ8N3L3 684 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 OR2T34Q8NGX1 318 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 NETO1Q8TDF5 533 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 SLC39A8Q9C0K1 460 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 TNKS2Q9H2K2 1166 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 PCDH18Q9HCL0 1135 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
CD28-203ENST00000458610 FCF1Q9Y324 198 aaKnown RBP16.45■□□□□ 0.22
CD28-203ENST00000458610 DOCK4Q8N1I0 1966 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 SPAG17Q6Q759 2223 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 ABCA7Q8IZY2 2146 aa16.45■□□□□ 0.22
CD28-203ENST00000458610 KPNA3O00505 521 aaPredicted RBP16.44■□□□□ 0.22
CD28-203ENST00000458610 CD160O95971 181 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 SERPINF2P08697 491 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 FECHP22830 423 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
CD28-203ENST00000458610 RHOAP61586 193 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
CD28-203ENST00000458610 CCDC6Q16204 474 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 TRIM61Q5EBN2 209 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 ARSIQ5FYB1 569 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 KIAA0895LQ68EN5 471 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 SLC23A3Q6PIS1 610 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 LRRC49Q8IUZ0 686 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 AADATQ8N5Z0 425 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 OR2AP1Q8NGE2 309 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 OR14C36Q8NHC7 312 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 CSPG4P5Q96PW8 444 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
CD28-203ENST00000458610 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.44■□□□□ 0.22
CD28-203ENST00000458610 PLXND1Q9Y4D7 1925 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3DA0A087WVF3 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3IA0A087WXS9 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3EA0A087X179 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3KA0A087X1G2 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 A0A1B0GTW7 788 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3FA6NER0 549 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3LB9A6J9 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 DFFAO00273 331 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 PRAMEF11O60813 436 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 TMCC1O94876 653 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 FSBPO95073 299 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 NDUFA10O95299 355 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms