RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CEP85LQ5SZL2 805 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 C6orf118Q5T5N4 469 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ADGRF1Q5T601 910 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 AFMIDQ63HM1 303 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 FBXL22Q6P050 247 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ZNF783Q6ZMS7 281 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CHST9Q7L1S5 443 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PID1Q7Z2X4 250 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PRUNE1Q86TP1 453 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 NLRP14Q86W24 1093 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ZNF354CQ86Y25 554 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CCDC117Q8IWD4 279 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 ZNF683Q8IZ20 524 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 LGI2Q8N0V4 545 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 RIBC1Q8N443 379 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 HJURPQ8NCD3 748 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PRMT1Q99873 361 aaKnown RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 SH3GL2Q99962 352 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 TMEM109Q9BVC6 243 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ROPN1BQ9BZX4 212 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 MAGEH1Q9H213 219 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 GBA3Q9H227 469 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 C10orf88Q9H8K7 445 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ROPN1Q9HAT0 212 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 DLL3Q9NYJ7 618 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 RSPH14Q9UHP6 348 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CDH22Q9UJ99 828 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 MFHAS1Q9Y4C4 1052 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 USP24Q9UPU5 2620 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 FRYLO94915 3013 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 C2orf78A6NCI8 922 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 HIDE1A8MVS5 230 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 RASA4BC9J798 803 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 E7ESA3 106 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 MATN3O15232 486 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ALOX15BO15296 676 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 TP73O15350 636 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CCL16O15467 120 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 RASA4O43374 803 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CLASP2O75122 1294 aaKnown RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 KRT37O76014 449 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 TMEM63AO94886 807 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ACSL3O95573 720 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 SPATA31D3P0C874 917 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 IRF1P10914 325 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 MYL4P12829 197 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CCNB1P14635 433 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 AOC1P19801 751 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 EPHA5P54756 1037 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 OXCT1P55809 520 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF177Q13360 481 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 POLD3Q15054 466 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 KRT71Q3SY84 523 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 TEX44Q53QW1 395 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 AGBL2Q5U5Z8 902 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ARMC3Q5W041 872 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 NAPEPLDQ6IQ20 393 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 SPATA31D4Q6ZUB0 917 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 C14orf80Q86SX3 495 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 LINC00523Q86TU6 105 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 SETD3Q86TU7 594 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 TMC8Q8IU68 726 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CCNJLQ8IV13 435 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 DENND1CQ8IV53 801 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ARHGAP12Q8IWW6 846 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZBED8Q8IZ13 594 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF567Q8N184 647 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF557Q8N988 423 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 CELF6Q96J87 481 aaKnown RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF599Q96NL3 588 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 NECTIN4Q96NY8 510 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 CORO1BQ9BR76 489 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 NAT9Q9BTE0 207 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 SEMA4AQ9H3S1 761 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 LRRC40Q9H9A6 602 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ETNK1Q9HBU6 452 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 ZNF334Q9HCZ1 680 aaPredicted RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 DZANK1Q9NVP4 752 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 MPP6Q9NZW5 540 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 IPO11Q9UI26 975 aaKnown RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 STOML2Q9UJZ1 356 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 AAR2Q9Y312 384 aaKnown RBP9.12□□□□□ -0.95
VPS50-207ENST00000458530 CPQQ9Y646 472 aa9.12□□□□□ -0.95
VPS50-207ENST00000458530 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
VPS50-207ENST00000458530 GOLGA8MH3BSY2 632 aa9.11□□□□□ -0.95
VPS50-207ENST00000458530 KCNK1O00180 336 aa9.11□□□□□ -0.95
VPS50-207ENST00000458530 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
VPS50-207ENST00000458530 PI15O43692 258 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms