RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CCR1P32246 355 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CSF2RBP32927 897 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CIITAP33076 1130 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 WNT5AP41221 380 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 DPP6P42658 865 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 HSPA13P48723 471 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CCR3P51677 355 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 LUMP51884 338 aaPredicted RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 MRPL12P52815 198 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 HNRNPH2P55795 449 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 GSDMDP57764 484 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 ERVK-21P61565 698 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 ASIC1P78348 528 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TAP2Q03519 686 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 RPA4Q13156 261 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 MSLNQ13421 630 aaPredicted RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 AANATQ16613 207 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 KCTD21Q4G0X4 260 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CTXN3Q4LDR2 81 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CFAP157Q5JU67 520 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 SHEQ5VZ18 495 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 OVCH2Q7RTZ1 564 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 UBE3BQ7Z3V4 1068 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 TAF8Q7Z7C8 310 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 C10orf67Q8IYJ2 551 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 KIAA2013Q8IYS2 634 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 ST13P4Q8IZP2 240 aaPredicted RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 BBS5Q8N3I7 341 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CLHC1Q8NHS4 586 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CHTF18Q8WVB6 975 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 PEX13Q92968 403 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 HDAC10Q969S8 669 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TMIGD2Q96BF3 282 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 AHCYL2Q96HN2 611 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 ALS2CR12Q96Q35 445 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 SIN3AQ96ST3 1273 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 HNRNPABQ99729 332 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 PYM1Q9BRP8 204 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 C9orf16Q9BUW7 83 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 THUMPD3Q9BV44 507 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 CCSER1Q9C0I3 900 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 PAIP1Q9H074 479 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 AGPAT3Q9NRZ7 376 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 INTS13Q9NVM9 706 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 MIS18AQ9NYP9 233 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 MAD2L2Q9UI95 211 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 ANAPC5Q9UJX4 755 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TLK1Q9UKI8 766 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TTC7AQ9ULT0 858 aaPredicted RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 STX8Q9UNK0 236 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 KLHL20Q9Y2M5 609 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TESMINQ9Y4I5 508 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TNPO3Q9Y5L0 923 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 ABCA3Q99758 1704 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 THSD7AQ9UPZ6 1657 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 NPHP3Q7Z494 1330 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ADGRB2O60241 1585 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TRBV23-1A0A0A0MS06 115 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 XKRY2A2RUG3 117 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GOLGA8JA6NMD2 632 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 OR5K4A6NMS3 321 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 F8W8V4 182 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 H0Y858 1186 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 H0YIN7 160 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GOLGA8TH3BQL2 631 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 H3BQV1 296 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GTPBP1O00178 669 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 O00370 1275 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ATP2A1O14983 1001 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 PEX1O43933 1283 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ATP5HO75947 161 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CLPTM1O96005 669 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 WEE2P0C1S8 567 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GOLGA8HP0CJ92 632 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 RALAP11233 206 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ALADP13716 330 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CASTP20810 708 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 CDC25CP30307 473 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 MAGEA4P43358 317 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ARCN1P48444 511 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 GCLCP48506 637 aaPredicted RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 PCP4P48539 62 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 AMPHP49418 695 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GDI2P50395 445 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 NFIL3Q16649 462 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 MOGQ16653 247 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ZNF568Q3ZCX4 644 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 FLYWCH1Q4VC44 716 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 HSP90AA4PQ58FG1 418 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 GRTP1Q5TC63 336 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 RNF220Q5VTB9 566 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CES4AQ5XG92 561 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TCTN3Q6NUS6 607 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TRIM65Q6PJ69 517 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 SLC30A9Q6PML9 568 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms