RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CRIM1Q9NZV1 1036 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 USP36Q9P275 1121 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 XPO7Q9UIA9 1087 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PLA2G4CQ9UP65 541 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 HBS1LQ9Y450 684 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ACTL7BQ9Y614 415 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TRPM6Q9BX84 2022 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 A0A1B0GTW7 788 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 A0A1B0GVT2 93 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FAM170AA1A519 330 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FAM47DPA6NHR8 397 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SRRM3A6NNA2 597 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 UPK3BL1B0FP48 263 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 UPK3BL2E5RIL1 263 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 M0QYV0 167 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 PSMA7O14818 248 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SART1O43290 800 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 ACSL4O60488 711 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FSBPO95073 299 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 MOCS2O96007 188 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 LTFP02788 710 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 PAEPP09466 180 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 PABPC1P11940 636 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 KRT5P13647 590 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 POLR2EP19388 210 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TBXAS1P24557 533 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 NOS3P29474 1203 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 OXTRP30559 389 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 NTF4P34130 210 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 HOXD12P35452 270 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 DPP6P42658 865 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 GPD2P43304 727 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TBX4P57082 545 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 YWHAEP62258 255 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 RPS14P62263 151 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 PITX1P78337 314 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 LRRC63Q05C16 580 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CAMK4Q16566 473 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 KIF19Q2TAC6 998 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 HLA-BQ31612 363 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 COBLL1Q53SF7 1204 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CCDC157Q569K6 752 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FAM133BQ5BKY9 247 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FSCBQ5H9T9 825 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 PIK3R6Q5UE93 754 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TTI2Q6NXR4 508 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 DENND1BQ6P3S1 775 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 MFN1Q8IWA4 741 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 APCDD1Q8J025 514 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CARNMT1Q8N4J0 409 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 C2CD4AQ8NCU7 369 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CADM4Q8NFZ8 388 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 OR2T3Q8NH03 318 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 GANCQ8TET4 914 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 BIRC7Q96CA5 298 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SCARF2Q96GP6 870 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CCDC34Q96HJ3 373 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 LMLNQ96KR4 655 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TIGD1Q96MW7 591 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CRACR2AQ9BSW2 395 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 GTPBP4Q9BZE4 634 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 NEUROG2Q9H2A3 272 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 LHX5Q9H2C1 402 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 FAM124BQ9H5Z6 455 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 METTL14Q9HCE5 456 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 UBE2TQ9NPD8 197 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CNGB3Q9NQW8 809 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 TJP2Q9UDY2 1190 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CYTH4Q9UIA0 394 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SLCO3A1Q9UIG8 710 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 GGA2Q9UJY4 613 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 STOML2Q9UJZ1 356 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 INTS6Q9UL03 887 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 KIAA1257Q9ULG3 409 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 CTNND2Q9UQB3 1225 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 MSRB2Q9Y3D2 182 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SNX11Q9Y5W9 270 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 ACACAQ13085 2346 aa4.86□□□□□ -1.63
GTF3C3-208ENST00000455546 SYNJ2BP-COX16A0A087WUM0 186 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 MEGF11A6BM72 1044 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 TTC34A8MYJ7 566 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 PLK4O00444 970 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 WNT9AO14904 365 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 NPC1O15118 1278 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 PAPSS1O43252 624 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 THAP12O43422 761 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 CBFA2T3O75081 653 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 GRAP2O75791 330 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 LETM1O95202 739 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 TIAF1O95411 115 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 SEMA4FO95754 770 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 IGLV3-19P01714 112 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 IGLV3-27P01718 113 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 DNTTP04053 509 aa4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 ATP5BP06576 529 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-208ENST00000455546 DLDP09622 509 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms