RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NOLC1Q14978 699 aaKnown RBP eCLIP3.94□□□□□ -1.78
RBM39-220ENST00000455343 SAFBQ15424 915 aaKnown RBP eCLIP3.94□□□□□ -1.78
RBM39-220ENST00000455343 STILQ15468 1287 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 SMAD1Q15797 465 aaKnown RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 FAM209AQ5JX71 171 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 MIIPQ5JXC2 388 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 EOGTQ5NDL2 527 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 EMC10Q5UCC4 262 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 AGBL4Q5VU57 503 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 DSTYKQ6XUX3 929 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 SLC36A4Q6YBV0 504 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 Q6ZSN1 163 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 RUFY3Q7L099 469 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 CXXC5Q7LFL8 322 aaKnown RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 POLNQ7Z5Q5 900 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 GALNT15Q8N3T1 639 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 TMEM161BQ8NDZ6 487 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 LEO1Q8WVC0 666 aaPredicted RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 DNASE2BQ8WZ79 361 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 MRPS31Q92665 395 aaKnown RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 EXOC2Q96KP1 924 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 DPYSL5Q9BPU6 564 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 TCHPQ9BT92 498 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 BHMT2Q9H2M3 363 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 FAM124BQ9H5Z6 455 aaPredicted RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 C17orf75Q9HAS0 396 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 SMURF1Q9HCE7 757 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 TMLHEQ9NVH6 421 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 GALNT8Q9NY28 637 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 PFDN2Q9UHV9 154 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 ING1Q9UK53 422 aaPredicted RBP3.94□□□□□ -1.78
RBM39-220ENST00000455343 FBXO10Q9UK96 956 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 NFE2L3Q9Y4A8 694 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 PCDHGB2Q9Y5G2 931 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 SPAG17Q6Q759 2223 aa3.94□□□□□ -1.78
RBM39-220ENST00000455343 TDRD15B5MCY1 1934 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 MYO18BQ8IUG5 2567 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 TCRBV21S2A2A0A5A6 115 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CCDC66A2RUB6 948 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 C2orf78A6NCI8 922 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 PRAMEF25A6NGN4 478 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 MYMKA6NI61 221 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CCDC169A6NNP5 214 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 LACTBL1A8MY62 500 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 BTBD18B2RXH4 712 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 NPIPB8E9PQR5 432 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CLDN3O15551 220 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ARHGAP6O43182 974 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 XPOTO43592 962 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 HIP1RO75146 1068 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ZNF217O75362 1048 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 KAT7O95251 611 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CTDNEP1O95476 244 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 KLF8O95600 359 aaPredicted RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 MPIG6BO95866 241 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 OLFM2O95897 454 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CYP17A1P05093 508 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CLTAP09496 248 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ATXN1LP0C7T5 689 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 XBP1P17861 261 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 HDCP19113 662 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ACO1P21399 889 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 PSMA5P28066 241 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CDC25AP30304 524 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 KRT2P35908 639 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ADCY8P40145 1251 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 EIF2S3P41091 472 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 TNFSF9P41273 254 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 TNFRSF4P43489 277 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 GPR15P49685 360 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 GUCY2FP51841 1108 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 JAM2P57087 298 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 GABREP78334 506 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 SLC7A9P82251 487 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 BNC1Q01954 994 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CFHR1Q03591 330 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 GRIK2Q13002 908 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 FOXE3Q13461 319 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 DHCR24Q15392 516 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 TAF12Q16514 161 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 NFE2Q16621 373 aaPredicted RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 TBR1Q16650 682 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 NRN1LQ496H8 165 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CFAP221Q4G0U5 840 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ZC2HC1CQ53FD0 456 aaPredicted RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 C9orf57Q5W0N0 161 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 WSCD1Q658N2 575 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 RHBDF2Q6PJF5 856 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CPLX2Q6PUV4 134 aaKnown RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 C1orf186Q6ZWK4 172 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 LARP4Q71RC2 724 aaKnown RBP eCLIP3.93□□□□□ -1.78
RBM39-220ENST00000455343 OSTM1Q86WC4 334 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 MARCH9Q86YJ5 346 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 CD302Q8IX05 232 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 DEFB119Q8N690 84 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 ARL14EPQ8N8R7 260 aaPredicted RBP3.93□□□□□ -1.78
RBM39-220ENST00000455343 TRIML1Q8N9V2 468 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 SPATA18Q8TC71 538 aa3.93□□□□□ -1.78
RBM39-220ENST00000455343 HMGB4Q8WW32 186 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms