RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PTPRN2Q92932 1015 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ROPN1BQ9BZX4 212 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 BRD8Q9H0E9 1235 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ROPN1Q9HAT0 212 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 ABCB8Q9NUT2 735 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CTTNBP2NLQ9P2B4 639 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ZNF510Q9Y2H8 683 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 USP15Q9Y4E8 981 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 TTLL3Q9Y4R7 772 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 WASF2Q9Y6W5 498 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 IGLV3-16A0A075B6K0 115 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 TK2O00142 265 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CHADO15335 359 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 LILRB5O75023 590 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CD19P15391 556 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 TBX4P57082 545 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 XIAPP98170 497 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 MGAT5Q09328 741 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 LMAN2Q12907 356 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 GAS6Q14393 721 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 MAP9Q49MG5 647 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 SND1Q7KZF4 910 aaKnown RBP eCLIP5.06□□□□□ -1.6
RIF1-207ENST00000454583 ITIH5Q86UX2 942 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 TMEM25Q86YD3 366 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 C12orf76Q8N812 135 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 OR13J1Q8NGT2 312 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 DCAKDQ8WVC6 231 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FBXO32Q969P5 355 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 SCARF2Q96GP6 870 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 PSKH2Q96QS6 385 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FAM129BQ96TA1 746 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FAM126AQ9BYI3 521 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 SLC2A11Q9BYW1 496 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CPEB1Q9BZB8 566 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 FOXP3Q9BZS1 431 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CDC42EP4Q9H3Q1 356 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 CYP4F11Q9HBI6 524 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 MARCH2Q9P0N8 246 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 RABGEF1Q9UJ41 708 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CPQQ9Y646 472 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 EXPH5Q8NEV8 1989 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 PIKFYVEQ9Y2I7 2098 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 GOLGA6BA6NDN3 693 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CEP104O60308 925 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 LUC7L3O95232 432 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 ZSCAN5DPP0CG00 497 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GJA1P17302 382 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 MDH1P40925 334 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 CTSOP43234 321 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 PAPOLAP51003 745 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 DEUP1Q05D60 604 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 PARP15Q460N3 678 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 NUGGCQ68CJ6 796 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CWF19L1Q69YN2 538 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 TXNDC11Q6PKC3 985 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 VPS36Q86VN1 386 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 LRRC49Q8IUZ0 686 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TTC30BQ8N4P2 665 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 OR2W6PQ8NHA6 318 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SMARCD2Q92925 531 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 FAM193BQ96PV7 902 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 ZYG11BQ9C0D3 744 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CEP44Q9C0F1 390 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 EPN3Q9H201 632 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 C10orf88Q9H8K7 445 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SP110Q9HB58 689 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SLC12A4Q9UP95 1085 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 KRBA1A5PL33 1030 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 PI4K2BG5E9Z4 385 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 LDB2O43679 373 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TTC4O95801 387 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SBK3P0C264 359 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GLULP15104 373 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 RBL1P28749 1068 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SUOXP51687 545 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 NEK3P51956 506 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 ZNF140P52738 457 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 PMS2P54278 862 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 EIF3BP55884 814 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 PRSS12P56730 875 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TAS2R38P59533 333 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 RFTN1Q14699 578 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 RALGPS1Q5JS13 557 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SPDYAQ5MJ70 313 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 C6orf132Q5T0Z8 1188 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 C9orf64Q5T6V5 341 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 FAM117BQ6P1L5 589 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CIR1Q86X95 450 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 C1orf216Q8TAB5 229 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 PCMTD1Q96MG8 357 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 FCRL3Q96P31 734 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 NAP1L3Q99457 506 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 LGMNQ99538 433 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms