RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 PTPN9P43378 593 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 SELENOVP59797 346 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 TBL3Q12788 808 aaKnown RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 BIRC3Q13489 604 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 PARM1Q6UWI2 310 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 TRAPPC11Q7Z392 1133 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 PIM3Q86V86 326 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 ZDHHC17Q8IUH5 632 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 NSMCE1Q8WV22 266 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 USP13Q92995 863 aaPredicted RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 TRIM63Q969Q1 353 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 SH3KBP1Q96B97 665 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 NPLQ9BXD5 320 aaPredicted RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 FAM234AQ9H0X4 552 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 CXorf56Q9H5V9 222 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 TTC12Q9H892 705 aaPredicted RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 SIRT3Q9NTG7 399 aaPredicted RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 ATP8A2Q9NTI2 1148 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 RRN3Q9NYV6 651 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 TBC1D14Q9P2M4 693 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 NLKQ9UBE8 527 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
PMS1-218ENST00000452382 LRRFIP2Q9Y608 721 aaKnown RBP4.22□□□□□ -1.73
PMS1-218ENST00000452382 LOC102724159A0A0B4J2E5 919 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 FAM90A10PA6NDY2 464 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 CD8B2A6NJW9 211 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 SH2D7A6NKC9 451 aaPredicted RBP4.21□□□□□ -1.74
PMS1-218ENST00000452382 H3BNX3 289 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 ZC3H11AO75152 810 aaKnown RBP eCLIP4.21□□□□□ -1.74
PMS1-218ENST00000452382 ADAP00813 363 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 MYZAPP0CAP1 466 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 CPA1P15085 419 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 CHRNB2P17787 502 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 CLCNKBP51801 687 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 VAMP2P63027 116 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.21□□□□□ -1.74
PMS1-218ENST00000452382 PTGR1Q14914 329 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 PWP2Q15269 919 aaKnown RBP4.21□□□□□ -1.74
PMS1-218ENST00000452382 SLC18A3Q16572 532 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 PRTGQ2VWP7 1150 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 FBXO43Q4G163 708 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 TMEM268Q5VZI3 342 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 ATG16L1Q676U5 607 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 CRELD2Q6UXH1 353 aaPredicted RBP4.21□□□□□ -1.74
PMS1-218ENST00000452382 C9orf47Q6ZRZ4 202 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 TMTC1Q8IUR5 882 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 RAB40AQ8WXH6 277 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.21□□□□□ -1.74
PMS1-218ENST00000452382 IFT27Q9BW83 186 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 MYH16Q9H6N6 1097 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 PDP2Q9P2J9 529 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 SEL1LQ9UBV2 794 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 ANAPC4Q9UJX5 808 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 SQORQ9Y6N5 450 aa4.21□□□□□ -1.74
PMS1-218ENST00000452382 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 C17orf102A2RUQ5 167 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 PEX12O00623 359 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 HSPB6O14558 160 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 ANP32CO43423 234 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 HBP1O60381 514 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 OAZ2O95190 189 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 CLDN7O95471 211 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 SERPINC1P01008 464 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 CHRM4P08173 479 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 GNLYP22749 145 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 TKTP29401 623 aaKnown RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 GOLGA8FQ08AF8 430 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 RUSC1-AS1Q66K80 236 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 RETSATQ6NUM9 610 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 C17orf99Q6UX52 265 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 SERPINA11Q86U17 422 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 ZNF354CQ86Y25 554 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 FAM217AQ8IXS0 508 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 SMAP1Q8IYB5 467 aaPredicted RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 DPP10Q8N608 796 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 LRRC57Q8N9N7 239 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 GABPB2Q8TAK5 448 aaPredicted RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 TMEM163Q8TC26 289 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 TMEM170AQ8WVE7 144 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 LPAR1Q92633 364 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 MAELQ96JY0 434 aaKnown RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 PLEKHB1Q9UF11 243 aaPredicted RBP4.2□□□□□ -1.74
PMS1-218ENST00000452382 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.2□□□□□ -1.74
PMS1-218ENST00000452382 ZNF580Q9UK33 172 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 EVPLQ92817 2033 aa4.2□□□□□ -1.74
PMS1-218ENST00000452382 GOLGA6L10A0A0M3HER8 536 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 CLEC18AA5D8T8 446 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 FAM157AC9JC47 383 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 EYA2O00167 538 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 HOXC11O43248 304 aaPredicted RBP4.19□□□□□ -1.74
PMS1-218ENST00000452382 STRNO43815 780 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 LCATP04180 440 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 ALPLP05186 524 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 POLBP06746 335 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 WEE2P0C1S8 567 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 CD72P21854 359 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 CCKBRP32239 447 aa4.19□□□□□ -1.74
PMS1-218ENST00000452382 PSMC2P35998 433 aaKnown RBP4.19□□□□□ -1.74
PMS1-218ENST00000452382 SKIV2L2P42285 1042 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms