RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 PRAMEF14Q5SWL7 426 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 DPY19L3Q6ZPD9 716 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
MSH5-209ENST00000450148 DRC7Q8IY82 874 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
MSH5-209ENST00000450148 RHBDD1Q8TEB9 315 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 SETD7Q8WTS6 366 aaKnown RBP12.63□□□□□ -0.39
MSH5-209ENST00000450148 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 SERAC1Q96JX3 654 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 TNKS2Q9H2K2 1166 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 RETREG1Q9H6L5 497 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 ATP13A1Q9HD20 1204 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 TMEM248Q9NWD8 314 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 TAS2R14Q9NYV8 317 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 WASF2Q9Y6W5 498 aa12.63□□□□□ -0.39
MSH5-209ENST00000450148 CXorf51AA0A1B0GTR3 108 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 CBX4O00257 560 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 CCP110O43303 1012 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 DFNA5O60443 496 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 PLEKP08567 350 aaPredicted RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 ATXN1LP0C7T5 689 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 RHOQP17081 205 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 MAT2AP31153 395 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 MAPKAPK2P49137 400 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 C21orf59P57076 290 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 NXPH1P58417 271 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 IL9RQ01113 521 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 OGDHQ02218 1023 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 ARL13BQ3SXY8 428 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 NAPEPLDQ6IQ20 393 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 PYROXD2Q8N2H3 581 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 ARHGEF2Q92974 986 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 ELF4Q99607 663 aaPredicted RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 SPON2Q9BUD6 331 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 SELENOOQ9BVL4 669 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
MSH5-209ENST00000450148 PREBQ9HCU5 417 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
MSH5-209ENST00000450148 LRRK1Q38SD2 2015 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 TLR4O00206 839 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 KPNA3O00505 521 aaPredicted RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 LEFTY1O75610 366 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 PRNPP04156 253 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 FERP16591 822 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 GRK6P43250 576 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 IQCB1Q15051 598 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 ARSIQ5FYB1 569 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 ACAD10Q6JQN1 1059 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 RETSATQ6NUM9 610 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 GATAD2AQ86YP4 633 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 SAP25Q8TEE9 199 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 TBC1D31Q96DN5 1066 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 CDC6Q99741 560 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 TTYH3Q9C0H2 523 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 DNAI1Q9UI46 699 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 ZFR2Q9UPR6 939 aaKnown RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 DMTF1Q9Y222 760 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 CA5BQ9Y2D0 317 aa12.61□□□□□ -0.39
MSH5-209ENST00000450148 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
MSH5-209ENST00000450148 GOLGA4Q13439 2230 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 RNGTTO60942 597 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 L1CAMP32004 1257 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 NUDT1P36639 197 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 RXRGP48443 463 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 CCNHP51946 323 aaPredicted RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 RWDD4Q6NW29 188 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 NEK5Q6P3R8 708 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 DNAJC24Q6P3W2 148 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 SLFN11Q7Z7L1 901 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 IQCHQ86VS3 1027 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 GRIN3AQ8TCU5 1115 aa12.6□□□□□ -0.39
MSH5-209ENST00000450148 ISG20Q96AZ6 181 aaKnown RBP12.6□□□□□ -0.39
MSH5-209ENST00000450148 MCEEQ96PE7 176 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms