RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 DUSP28Q4G0W2 176 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RNASEH2BQ5TBB1 312 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 ISLR2Q6UXK2 745 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 C16orf59Q7L2K0 433 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 LPCAT2Q7L5N7 544 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CLNKQ7Z7G1 428 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SLC4A11Q8NBS3 891 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ZYG11BQ9C0D3 744 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ZNF112Q9UJU3 913 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 DERAQ9Y315 318 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 C15orf38-AP3S2A0A0A6YYH1 394 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 MAXP61244 160 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 BCL2L1Q07817 233 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CCDC15Q0P6D6 951 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CNTN1Q12860 1018 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 FNBP1LQ5T0N5 605 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ARMC12Q5T9G4 340 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ARPINQ7Z6K5 226 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 LRRC49Q8IUZ0 686 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 STX19Q8N4C7 294 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 RRAGCQ9HB90 399 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 DYRK1BQ9Y463 629 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RPTORQ8N122 1335 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ARHGEF9O43307 516 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 FAM155BO75949 473 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PCNAP12004 261 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 DARSP14868 501 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 POU1F1P28069 291 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 USP4Q13107 963 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ANKRD22Q5VYY1 191 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SLC51AQ86UW1 340 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 TRIM69Q86WT6 500 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 FITM2Q8N6M3 262 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 UCMAQ8WVF2 138 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 TRAPPC9Q96Q05 1148 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 C12orf65Q9H3J6 166 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 STN1Q9H668 368 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 FAM105AQ9NUU6 356 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CDV3Q9UKY7 258 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 RPL26L1Q9UNX3 145 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 STXBP5LQ9Y2K9 1186 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PLLPQ9Y342 182 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 TULP2O00295 520 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 CABYRO75952 493 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 C2P06681 752 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 PAX7P23759 505 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 CHI3L1P36222 383 aaPredicted RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 NEK3P51956 506 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 DEFA1P59665 94 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 DEFA3P59666 94 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 STARD3Q14849 445 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 IL27RAQ6UWB1 636 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 MRPL57Q9BQC6 102 aaKnown RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 ARL8BQ9NVJ2 186 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 PNPOQ9NVS9 261 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 SH3BP4Q9P0V3 963 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 PIRTP0C851 137 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 TSPAN8P19075 237 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 IL5RAQ01344 420 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 UBE3AQ05086 875 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 NRF1Q16656 503 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 TRIM16LQ309B1 348 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 CERCAMQ5T4B2 595 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 LIPMQ5VYY2 423 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 NAIF1Q69YI7 327 aaPredicted RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 FAM45BPQ6NSW5 357 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 POTEHQ6S545 545 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 KIAA2013Q8IYS2 634 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 SPATA6LQ8N4H0 392 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 DHRSXQ8N5I4 330 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 FAM45AQ8TCE6 357 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 TRPC4APQ8TEL6 797 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 SNED1Q8TER0 1413 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 FCRL2Q96LA5 508 aaPredicted RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 NMUR2Q9GZQ4 415 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 CAB39LQ9H9S4 337 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 SELENONQ9NZV5 590 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 LNPEPQ9UIQ6 1025 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 TMCC3Q9ULS5 477 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 MYRFQ9Y2G1 1151 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 IPPQ9Y573 584 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 ATXN2Q99700 1313 aaKnown RBP10.53□□□□□ -0.72
CTC1-202ENST00000449476 A8MX80 341 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 PEX11AO75192 247 aa10.53□□□□□ -0.72
CTC1-202ENST00000449476 SNRPB2P08579 225 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms