RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CARM1Q86X55 608 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 C2orf40Q9H1Z8 148 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 SMARCAD1Q9H4L7 1026 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 STK39Q9UEW8 545 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CLOCKO15516 846 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 HOXC6P09630 235 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 FAAP100Q0VG06 881 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MTM1Q13496 603 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 FIBCD1Q8N539 461 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF641Q96N77 438 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 C1orf50Q9BV19 199 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 OSBPL11Q9BXB4 747 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 PCDHGA11Q9Y5H2 935 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ASB14A6NK59 587 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 GJB1P08034 283 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF26P17031 533 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MX2P20592 715 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MSX2P35548 267 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 AGAP7PQ5VUJ5 663 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ST14Q9Y5Y6 855 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 CROCCQ5TZA2 2017 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 CYB561D2O14569 222 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 GLRA3O75311 464 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 CRYZL1O95825 349 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 ACADSBP45954 432 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 POU5F1BQ06416 359 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 STILQ15468 1287 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 AMHR2Q16671 573 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 CCDC58Q4VC31 144 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 TAS2R42Q7RTR8 314 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 HEATR4Q86WZ0 1026 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 MYO1HQ8N1T3 1032 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 DEPDC1BQ8WUY9 529 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 TP63Q9H3D4 680 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 DNAJC16Q9Y2G8 782 aa13.67□□□□□ -0.22
SYNGAP1-204ENST00000449372 CENPBD1B2RD01 187 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 F8VP50 259 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ACKR2O00590 384 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 OGTO15294 1046 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 HBP1O60381 514 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 PRKCBP05771 671 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 FYNP06241 537 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 TGM2P21980 687 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 NKX2-5P52952 324 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ATXN3P54252 364 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 CSE1LP55060 971 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 TEX44Q53QW1 395 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 BOLA3Q53S33 107 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF667Q5HYK9 610 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 STXBP5Q5T5C0 1151 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 UBE2Q1Q7Z7E8 422 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ESX1Q8N693 406 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 FAM71DQ8N9W8 422 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ADPGKQ9BRR6 497 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 HACD3Q9P035 362 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 CNOT11Q9UKZ1 510 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 PLLPQ9Y342 182 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 KBTBD13C9JR72 458 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 SNAP91O60641 907 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 NOL3O60936 208 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 FAM155BO75949 473 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ALOX5P09917 674 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 PTPN1P18031 435 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 CDH5P33151 784 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 CLK3P49761 638 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 C2CD6Q53TS8 623 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 GPRC5AQ8NFJ5 357 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 NAT9Q9BTE0 207 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 TCRBV9S1A1TA0A576 114 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 NME3Q13232 169 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 TUBB3Q13509 450 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 PGS1Q32NB8 556 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 MGAT5BQ3V5L5 792 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ADAMTS16Q8TE57 1224 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 ACDQ96AP0 544 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 EGLN2Q96KS0 407 aa13.66□□□□□ -0.22
SYNGAP1-204ENST00000449372 DOK1Q99704 481 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms