RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 LPCAT2Q7L5N7 544 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 KBTBD6Q86V97 674 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 RYBPQ8N488 228 aaPredicted RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 RAPGEF5Q92565 580 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 KLC2Q9H0B6 622 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 TNKS2Q9H2K2 1166 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 SP110Q9HB58 689 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 ETNK2Q9NVF9 386 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 NCDNQ9UBB6 729 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 SALL4Q9UJQ4 1053 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 ADGRG1Q9Y653 693 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 MUC22E2RYF6 1773 aaPredicted RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 IGHV1OR15-9A0A0B4J2B8 117 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 MACROD2A1Z1Q3 448 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 TMCC1O94876 653 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 PRNPP04156 253 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 C5AR1P21730 350 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 BCKDHBP21953 392 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 CHRNA3P32297 505 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 SLC8A1P32418 973 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 RHOAP61586 193 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 SNRPD1P62314 119 aaKnown RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 CARD16Q5EG05 197 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 AFMIDQ63HM1 303 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 ARHGAP12Q8IWW6 846 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FANCMQ8IYD8 2048 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 ATPAF2Q8N5M1 289 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 NPWQ8N729 165 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FRMD1Q8N878 549 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 SUMF1Q8NBK3 374 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 NETO2Q8NC67 525 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 OR2A12Q8NGT7 310 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 NSMCE1Q8WV22 266 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 ISG20Q96AZ6 181 aaKnown RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 ZC3H10Q96K80 434 aaKnown RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FAM129BQ96TA1 746 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 OMDQ99983 421 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 TM6SF2Q9BZW4 377 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 PABPC3Q9H361 631 aaKnown RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 GOLPH3Q9H4A6 298 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 FBXL12Q9NXK8 326 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 IPO11Q9UI26 975 aaKnown RBP14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 ACTL7AQ9Y615 435 aa14.28□□□□□ -0.12
GTF3C3-206ENST00000448539 CKAP5Q14008 2032 aa14.27□□□□□ -0.12
GTF3C3-206ENST00000448539 DCHS1Q96JQ0 3298 aa14.27□□□□□ -0.12
GTF3C3-206ENST00000448539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF487B1APH4 448 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 J3KR12 359 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 MID1O15344 667 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 KRT86O43790 486 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 PALMO75781 387 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 RNASEH2AO75792 299 aaKnown RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 CD160O95971 181 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 CCDC175P0C221 793 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 IL4RP24394 825 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 DHPSP49366 369 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 RAD51Q06609 339 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 IL10RBQ08334 325 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 GSE1Q14687 1217 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 DPY19L3Q6ZPD9 716 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 USP30Q70CQ3 517 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 LRRC49Q8IUZ0 686 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 PLPP6Q8IY26 295 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 SYCE1Q8N0S2 351 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 PCDH19Q8TAB3 1148 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 RNF25Q96BH1 459 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 FAF2Q96CS3 445 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 LOXL4Q96JB6 756 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF830Q96NB3 372 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 HEPHQ9BQS7 1158 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 BTBD1Q9H0C5 482 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 CD93Q9NPY3 652 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 DYRK4Q9NR20 520 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 HECAQ9UBI9 543 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 TRIM10Q9UDY6 481 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 IL36AQ9UHA7 158 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 MBD1Q9UIS9 605 aaPredicted RBP14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 MFHAS1Q9Y4C4 1052 aa14.27□□□□□ -0.13
GTF3C3-206ENST00000448539 A0A1W2PP55 124 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 ZRANB2O95218 330 aaKnown RBP eCLIP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 IGSF6O95976 241 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 GSRP00390 522 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 IGLV3-19P01714 112 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 RETP07949 1114 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms