RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 C2orf27AQ580R0 203 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 CCDC181Q5TID7 509 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 RETSATQ6NUM9 610 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 LINGO4Q6UY18 593 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 ARHGAP36Q6ZRI8 547 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF354CQ86Y25 554 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 SYNPOQ8N3V7 929 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 KDM1BQ8NB78 822 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 PJA1Q8NG27 643 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 ACTRT1Q8TDG2 376 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 USP33Q8TEY7 942 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 CLDN23Q96B33 292 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 MS4A14Q96JA4 679 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 RPL10LQ96L21 214 aaKnown RBP7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 MRGPRX3Q96LB0 322 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 OLFM3Q96PB7 478 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 TSGA13Q96PP4 275 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 LGMNQ99538 433 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 BRD8Q9H0E9 1235 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 MFSD1Q9H3U5 465 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 THAP10Q9P2Z0 257 aaPredicted RBP7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 SLCO3A1Q9UIG8 710 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 HS3ST2Q9Y278 367 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 SIT1Q9Y3P8 196 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 SAR1BQ9Y6B6 198 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 TTC28Q96AY4 2481 aa7.7□□□□□ -1.18
AC004540.1-206ENST00000448056 COL4A2P08572 1712 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 NCOR1O75376 2440 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZSCAN5CA6NGD5 496 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 WASH3PC4AMC7 463 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 K7ERQ8 282 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 KIF2AO00139 706 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 MATN3O15232 486 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 SMAD6O43541 496 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 PI15O43692 258 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ATP9BO43861 1147 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 PEX11BO96011 259 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 PDGFBP01127 241 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 NNMTP40261 264 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 RPS9P46781 194 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 STK19P49842 368 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 GEMIN4P57678 1058 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ST8SIA6P61647 398 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 OTUD4Q01804 1114 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF33AQ06730 810 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 PPIDQ08752 370 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 XRCC4Q13426 336 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ENPP2Q13822 863 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 LRRC32Q14392 662 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF234Q14588 700 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 CYTH1Q15438 398 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 SIX1Q15475 284 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 LONRF2Q1L5Z9 754 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 HSF5Q4G112 596 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 FNDC3BQ53EP0 1204 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 INO80DQ53TQ3 878 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 EGFLAMQ63HQ2 1017 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 LEKR1Q6ZMV7 388 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 B4GALNT4Q76KP1 1039 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ADAT2Q7Z6V5 191 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZC3H18Q86VM9 953 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 CREG2Q8IUH2 290 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 CCDC105Q8IYK2 499 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 SH2D3CQ8N5H7 860 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ATPAF2Q8N5M1 289 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF513Q8N8E2 541 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 IL17RCQ8NAC3 791 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ATP11CQ8NB49 1132 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 CCNYQ8ND76 341 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 FLCNQ8NFG4 579 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ACTL9Q8TC94 416 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 TFB1MQ8WVM0 346 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 MAIP1Q8WWC4 291 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 FATE1Q969F0 183 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 HAUS1Q96CS2 278 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 HDAC11Q96DB2 347 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 MYO19Q96H55 970 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF599Q96NL3 588 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ACOX2Q99424 681 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 NAP1L3Q99457 506 aaPredicted RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 TMEM245Q9H330 911 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 EPHX3Q9H6B9 360 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 PDFQ9HBH1 243 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ZDHHC4Q9NPG8 344 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 SLC25A13Q9UJS0 675 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 R3HDM2Q9Y2K5 976 aaKnown RBP7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 ACTL7AQ9Y615 435 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 STON1Q9Y6Q2 735 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 DOCK4Q8N1I0 1966 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 COL4A3Q01955 1670 aa7.69□□□□□ -1.18
AC004540.1-206ENST00000448056 TTC34A8MYJ7 566 aa7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 HACD1B0YJ81 288 aa7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 ESPNB1AK53 854 aa7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 CHURC1-FNTBB4DL54 471 aa7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 H7C0C1 242 aa7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 PGRMC1O00264 195 aaKnown RBP7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
AC004540.1-206ENST00000448056 ADAM23O75077 832 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms