RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 WASH3PC4AMC7 463 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 RNF103O00237 685 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 RNF40O75150 1001 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 CHRNB1P11230 501 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 HLA-EP13747 358 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCNB1P14635 433 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 COILP38432 576 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 IL12RB1P42701 662 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 GDF10P55107 478 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 CKAP4Q07065 602 aaKnown RBP18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 SLC20A2Q08357 652 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 SIGLEC14Q08ET2 396 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 WASHC5Q12768 1159 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 DLG2Q15700 870 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 ACCSLQ4AC99 568 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 HEATR6Q6AI08 1181 aaKnown RBP18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 KLHL7Q8IXQ5 586 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 FAM71DQ8N9W8 422 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 NSMCE1Q8WV22 266 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 HTR3CQ8WXA8 447 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 ERLEC1Q96DZ1 483 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF599Q96NL3 588 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 DDX47Q9H0S4 455 aaKnown RBP18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 TNKS2Q9H2K2 1166 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 LMAN1LQ9HAT1 526 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 USP29Q9HBJ7 922 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 NT5MQ9NPB1 228 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 HOMER3Q9NSC5 361 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 LHX3Q9UBR4 397 aa18.31■□□□□ 0.52
TRAPPC4-203ENST00000447216 KLF8O95600 359 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 PDGFBP01127 241 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 HNRNPLP14866 589 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 PRKCHP24723 683 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 PTPN3P26045 913 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 MMP13P45452 471 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 GEMIN4P57678 1058 aaKnown RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 ST8SIA6P61647 398 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 IFI35P80217 286 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF33AQ06730 810 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF235Q14590 738 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 INO80DQ53TQ3 878 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 DGKKQ5KSL6 1271 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 MARC1Q5VT66 337 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 C22orf39Q6P5X5 142 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 DRICH1Q6PGQ1 229 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 Q6ZS52 159 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 PGBD5Q8N414 524 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 TSEN2Q8NCE0 465 aaKnown RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 SPATA4Q8NEY3 305 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 FATE1Q969F0 183 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 EXOC2Q96KP1 924 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 IL12RB2Q99665 862 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 CINPQ9BW66 212 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 TM6SF2Q9BZW4 377 aa18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 RBM22Q9NW64 420 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 DRG1Q9Y295 367 aaKnown RBP18.3■□□□□ 0.52
TRAPPC4-203ENST00000447216 SGK1O00141 431 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 MUSKO15146 869 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ATP9BO43861 1147 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 BNIP3LO60238 219 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF821O75541 412 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ITGAVP06756 1048 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ETS1P14921 441 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 NNMTP40261 264 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 RGRP47804 291 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 RHOAP61586 193 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 FZD5Q13467 585 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 HNRNPDQ14103 355 aaKnown RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 RFTN1Q14699 578 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 FBXO43Q4G163 708 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ATXN7L2Q5T6C5 722 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 PKN3Q6P5Z2 889 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCDC137Q6PK04 289 aaKnown RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 TRIM67Q6ZTA4 783 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 Q6ZVU0 165 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF572Q7Z3I7 529 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 CHPFQ8IZ52 775 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZNF567Q8N184 647 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 TEX26Q8N6G2 289 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 CNTD1Q8N815 330 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 IL17RCQ8NAC3 791 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 FLCNQ8NFG4 579 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 RPLP0P6Q8NHW5 317 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 FRS2Q8WU20 508 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 AGAP3Q96P47 875 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 TMEM245Q9H330 911 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 POLR3BQ9NW08 1133 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 SEPT3Q9UH03 358 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 TTLL3Q9Y4R7 772 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 STON1Q9Y6Q2 735 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 A0A0C4DFX4 3053 aa18.29■□□□□ 0.52
TRAPPC4-203ENST00000447216 TTC24A2A3L6 582 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms