RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 N4BP2L1Q5TBK1 243 aaPredicted RBP15.06■□□□□ 0
USE1-202ENST00000445667 DPY19L3Q6ZPD9 716 aa15.06■□□□□ 0
USE1-202ENST00000445667 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
USE1-202ENST00000445667 RTL3Q8N8U3 475 aaKnown RBP15.06■□□□□ 0
USE1-202ENST00000445667 DEFB124Q8NES8 71 aa15.06■□□□□ 0
USE1-202ENST00000445667 ARRDC3Q96B67 414 aa15.06■□□□□ 0
USE1-202ENST00000445667 IQCDQ96DY2 449 aa15.06■□□□□ 0
USE1-202ENST00000445667 TRIM11Q96F44 468 aa15.06■□□□□ 0
USE1-202ENST00000445667 PEBP4Q96S96 227 aa15.06■□□□□ 0
USE1-202ENST00000445667 IL21RQ9HBE5 538 aa15.06■□□□□ 0
USE1-202ENST00000445667 ARHGAP20Q9P2F6 1191 aa15.06■□□□□ 0
USE1-202ENST00000445667 HPCAL4Q9UM19 191 aa15.06■□□□□ 0
USE1-202ENST00000445667 AP4E1Q9UPM8 1137 aa15.06■□□□□ 0
USE1-202ENST00000445667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.06■□□□□ 0
USE1-202ENST00000445667 SCINQ9Y6U3 715 aa15.06■□□□□ 0
USE1-202ENST00000445667 A0A1W2PPC4 97 aa15.05■□□□□ -0
USE1-202ENST00000445667 GJB3O75712 270 aa15.05■□□□□ -0
USE1-202ENST00000445667 RNF8O76064 485 aa15.05■□□□□ -0
USE1-202ENST00000445667 TPM3P06753 285 aa15.05■□□□□ -0
USE1-202ENST00000445667 ADRB1P08588 477 aa15.05■□□□□ -0
USE1-202ENST00000445667 CD59P13987 128 aa15.05■□□□□ -0
USE1-202ENST00000445667 MIPP30301 263 aa15.05■□□□□ -0
USE1-202ENST00000445667 RECQLP46063 649 aaPredicted RBP15.05■□□□□ -0
USE1-202ENST00000445667 AFF3P51826 1226 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 PPP2CBP62714 309 aa15.05■□□□□ -0
USE1-202ENST00000445667 PPP2CAP67775 309 aa15.05■□□□□ -0
USE1-202ENST00000445667 HLA-BQ31612 363 aa15.05■□□□□ -0
USE1-202ENST00000445667 CARD16Q5EG05 197 aa15.05■□□□□ -0
USE1-202ENST00000445667 KCNT1Q5JUK3 1230 aa15.05■□□□□ -0
USE1-202ENST00000445667 AGBL4Q5VU57 503 aa15.05■□□□□ -0
USE1-202ENST00000445667 VPS36Q86VN1 386 aa15.05■□□□□ -0
USE1-202ENST00000445667 PCDH20Q8N6Y1 951 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 NETO2Q8NC67 525 aa15.05■□□□□ -0
USE1-202ENST00000445667 TMIEQ8NEW7 156 aa15.05■□□□□ -0
USE1-202ENST00000445667 GRIN3AQ8TCU5 1115 aa15.05■□□□□ -0
USE1-202ENST00000445667 FNIP1Q8TF40 1166 aa15.05■□□□□ -0
USE1-202ENST00000445667 FAM131CQ96AQ9 280 aa15.05■□□□□ -0
USE1-202ENST00000445667 SNRNP25Q9BV90 132 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 TM6SF2Q9BZW4 377 aa15.05■□□□□ -0
USE1-202ENST00000445667 ZDHHC5Q9C0B5 715 aa15.05■□□□□ -0
USE1-202ENST00000445667 KLC2Q9H0B6 622 aa15.05■□□□□ -0
USE1-202ENST00000445667 THAP2Q9H0W7 228 aa15.05■□□□□ -0
USE1-202ENST00000445667 DHX35Q9H5Z1 703 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 GAREM1Q9H706 876 aa15.05■□□□□ -0
USE1-202ENST00000445667 CATSPERBQ9H7T0 1116 aa15.05■□□□□ -0
USE1-202ENST00000445667 MRPL47Q9HD33 250 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 DNAAF2Q9NVR5 837 aaKnown RBP15.05■□□□□ -0
USE1-202ENST00000445667 IL36AQ9UHA7 158 aa15.05■□□□□ -0
USE1-202ENST00000445667 ANKRD6Q9Y2G4 727 aa15.05■□□□□ -0
USE1-202ENST00000445667 CACNA1AO00555 2505 aa15.04■□□□□ -0
USE1-202ENST00000445667 WASH4PA8MWX3 477 aa15.04■□□□□ -0
USE1-202ENST00000445667 C10orf142B7Z368 130 aa15.04■□□□□ -0
USE1-202ENST00000445667 RASA4BC9J798 803 aa15.04■□□□□ -0
USE1-202ENST00000445667 KCNK3O14649 394 aa15.04■□□□□ -0
USE1-202ENST00000445667 WNT9AO14904 365 aa15.04■□□□□ -0
USE1-202ENST00000445667 RASA4O43374 803 aa15.04■□□□□ -0
USE1-202ENST00000445667 CBFA2T2O43439 604 aa15.04■□□□□ -0
USE1-202ENST00000445667 PLRG1O43660 514 aaKnown RBP15.04■□□□□ -0
USE1-202ENST00000445667 KDELR3O43731 214 aa15.04■□□□□ -0
USE1-202ENST00000445667 PRPSAP2O60256 369 aa15.04■□□□□ -0
USE1-202ENST00000445667 LEFTY1O75610 366 aa15.04■□□□□ -0
USE1-202ENST00000445667 PRNPP04156 253 aa15.04■□□□□ -0
USE1-202ENST00000445667 CSRP1P21291 193 aaKnown RBP15.04■□□□□ -0
USE1-202ENST00000445667 MAT2AP31153 395 aaKnown RBP15.04■□□□□ -0
USE1-202ENST00000445667 CCR5P51681 352 aa15.04■□□□□ -0
USE1-202ENST00000445667 TAS2R38P59533 333 aa15.04■□□□□ -0
USE1-202ENST00000445667 TPI1P60174 286 aa15.04■□□□□ -0
USE1-202ENST00000445667 TEAD4Q15561 434 aa15.04■□□□□ -0
USE1-202ENST00000445667 KIF19Q2TAC6 998 aa15.04■□□□□ -0
USE1-202ENST00000445667 CCDC122Q5T0U0 273 aa15.04■□□□□ -0
USE1-202ENST00000445667 ALKBH5Q6P6C2 394 aaKnown RBP15.04■□□□□ -0
USE1-202ENST00000445667 CYP4V2Q6ZWL3 525 aaPredicted RBP15.04■□□□□ -0
USE1-202ENST00000445667 ADAT2Q7Z6V5 191 aaKnown RBP15.04■□□□□ -0
USE1-202ENST00000445667 HMCESQ96FZ2 354 aa15.04■□□□□ -0
USE1-202ENST00000445667 SLC6A18Q96N87 628 aa15.04■□□□□ -0
USE1-202ENST00000445667 KCTD15Q96SI1 283 aaPredicted RBP15.04■□□□□ -0
USE1-202ENST00000445667 HEPHQ9BQS7 1158 aa15.04■□□□□ -0
USE1-202ENST00000445667 CEP44Q9C0F1 390 aa15.04■□□□□ -0
USE1-202ENST00000445667 OSGEPQ9NPF4 335 aa15.04■□□□□ -0
USE1-202ENST00000445667 SNX11Q9Y5W9 270 aa15.04■□□□□ -0
USE1-202ENST00000445667 WASF2Q9Y6W5 498 aa15.04■□□□□ -0
USE1-202ENST00000445667 EEF2KO00418 725 aaKnown RBP15.03■□□□□ -0
USE1-202ENST00000445667 SLC7A4O43246 635 aa15.03■□□□□ -0
USE1-202ENST00000445667 BUB1O43683 1085 aa15.03■□□□□ -0
USE1-202ENST00000445667 LRCH4O75427 683 aa15.03■□□□□ -0
USE1-202ENST00000445667 CEACAM1P13688 526 aa15.03■□□□□ -0
USE1-202ENST00000445667 TCF4P15884 667 aa15.03■□□□□ -0
USE1-202ENST00000445667 GKP32189 559 aa15.03■□□□□ -0
USE1-202ENST00000445667 EIF4A3P38919 411 aaKnown RBP15.03■□□□□ -0
USE1-202ENST00000445667 GRIA4P48058 902 aa15.03■□□□□ -0
USE1-202ENST00000445667 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
USE1-202ENST00000445667 YBEYP58557 167 aaPredicted RBP15.03■□□□□ -0
USE1-202ENST00000445667 RACK1P63244 317 aaKnown RBP15.03■□□□□ -0
USE1-202ENST00000445667 PIP5KL1Q5T9C9 394 aa15.03■□□□□ -0
USE1-202ENST00000445667 SPECC1LQ69YQ0 1117 aa15.03■□□□□ -0
USE1-202ENST00000445667 PIP4P1Q86T03 277 aa15.03■□□□□ -0
USE1-202ENST00000445667 RYBPQ8N488 228 aaPredicted RBP15.03■□□□□ -0
USE1-202ENST00000445667 OR6K2Q8NGY2 324 aa15.03■□□□□ -0
USE1-202ENST00000445667 ARHGEF26Q96DR7 871 aa15.03■□□□□ -0
USE1-202ENST00000445667 CELF6Q96J87 481 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms