RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SLC7A6OSQ96CW6 309 aaPredicted RBP17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 SGF29Q96ES7 293 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 VPS39Q96JC1 886 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 HAPLN3Q96S86 360 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 RBBP8Q99708 897 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 CPNE1Q99829 537 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 PNPOQ9NVS9 261 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 TRIM17Q9Y577 477 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 KIAA0100Q14667 2235 aaKnown RBP17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 GLRA3O75311 464 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 SPRP35270 261 aaPredicted RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 CD86P42081 329 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 DSC2Q02487 901 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 UBAP2LQ14157 1087 aaKnown RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 PCLAFQ15004 111 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 HSF5Q4G112 596 aaPredicted RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 RNF135Q8IUD6 432 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 CCNJLQ8IV13 435 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 RTL3Q8N8U3 475 aaKnown RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 KCNV2Q8TDN2 545 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 SP110Q9HB58 689 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 AURKAO14965 403 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 USP1O94782 785 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 MLLT6P55198 1093 aaPredicted RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 NKX3-2P78367 333 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 FBXL22Q6P050 247 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 SLC41A1Q8IVJ1 513 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 FAM136AQ96C01 138 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 SCYL1Q96KG9 808 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 IL22Q9GZX6 179 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 NOL6Q9H6R4 1146 aaKnown RBP17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
LAPTM4B-201ENST00000445593 MTMR11A4FU01 709 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 TK2O00142 265 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 GSRP00390 522 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 C2P06681 752 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 ARRB2P32121 409 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 OCRLQ01968 901 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 USP10Q14694 798 aaKnown RBP17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 BHMTQ93088 406 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 MYO7AQ13402 2215 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 MATN3O15232 486 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 CCNCP24863 283 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 SLC1A6P48664 564 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 CLNS1AP54105 237 aaKnown RBP17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 USP4Q13107 963 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 NDNQ99608 321 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 HBS1LQ9Y450 684 aaKnown RBP17.07■□□□□ 0.32
LAPTM4B-201ENST00000445593 IRF1P10914 325 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 ACVRL1P37023 503 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 LIMK2P53671 638 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 CCDC15Q0P6D6 951 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 FBXO27Q8NI29 283 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 VAT1Q99536 393 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 TASP1Q9H6P5 420 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 SOX13Q9UN79 622 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 EIF4E1BA6NMX2 242 aaKnown RBP17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 FGF3P11487 239 aaPredicted RBP17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 WNT3AP56704 352 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 EIF4EBP2Q13542 120 aaPredicted RBP17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 GRTP1Q5TC63 336 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 MBLAC2Q68D91 279 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 EXOC2Q96KP1 924 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 CASD1Q96PB1 797 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 MIPEPQ99797 713 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 MAN1C1Q9NR34 630 aa17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 FNDC3AQ9Y2H6 1198 aaKnown RBP17.06■□□□□ 0.32
LAPTM4B-201ENST00000445593 FGF10O15520 208 aaPredicted RBP17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 TLR5O60602 858 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 ESRRAP11474 423 aaPredicted RBP17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 CNTFP26441 200 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 PTPRCAPQ14761 206 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 CTC1Q2NKJ3 1217 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 MANEALQ5VSG8 457 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 ZNF470Q6ECI4 717 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 KCTD4Q8WVF5 259 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 AAR2Q9Y312 384 aaKnown RBP17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 VWA8A3KMH1 1905 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 MEI4A8MW99 385 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 PROCP04070 461 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 CYP2C18P33260 490 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 CA8P35219 290 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 SERPINB8P50452 374 aa17.05■□□□□ 0.32
LAPTM4B-201ENST00000445593 FAM219BQ5XKK7 198 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms