RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CST6Q15828 149 aa24.44■■□□□ 1.5
C9orf3-207ENST00000445181 HMCESQ96FZ2 354 aa24.44■■□□□ 1.5
C9orf3-207ENST00000445181 TOE1Q96GM8 510 aaKnown RBP24.44■■□□□ 1.5
C9orf3-207ENST00000445181 CELF6Q96J87 481 aaKnown RBP24.44■■□□□ 1.5
C9orf3-207ENST00000445181 NOL6Q9H6R4 1146 aaKnown RBP24.44■■□□□ 1.5
C9orf3-207ENST00000445181 SCML1Q9UN30 329 aa24.44■■□□□ 1.5
C9orf3-207ENST00000445181 NCKAP1Q9Y2A7 1128 aa24.44■■□□□ 1.5
C9orf3-207ENST00000445181 BUB1O43683 1085 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 KDELR3O43731 214 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 KCNA4P22459 653 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 ITPKAP23677 461 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 RECQLP46063 649 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-207ENST00000445181 DNA2P51530 1060 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 NDST2P52849 883 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 C22orf39Q6P5X5 142 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 LEKR1Q6ZMV7 388 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 POLNQ7Z5Q5 900 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 KCTD6Q8NC69 237 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 FAM129BQ96TA1 746 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 TNKS2Q9H2K2 1166 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 PABPC3Q9H361 631 aaKnown RBP24.43■■□□□ 1.5
C9orf3-207ENST00000445181 PCDH18Q9HCL0 1135 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 EVLQ9UI08 416 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-207ENST00000445181 PILRBQ9UKJ0 227 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 FCF1Q9Y324 198 aaKnown RBP24.43■■□□□ 1.5
C9orf3-207ENST00000445181 DNAH14Q0VDD8 3507 aa24.43■■□□□ 1.5
C9orf3-207ENST00000445181 ZSCAN5CA6NGD5 496 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-207ENST00000445181 C4orf47A7E2U8 309 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 MID1O15344 667 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 ADH1BP00325 375 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 KRT7P08729 469 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 SLC8A1P32418 973 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 DPP6P42658 865 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 TAS2R40P59535 323 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 ZNF33AQ06730 810 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 DPYSQ14117 519 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 TRIM61Q5EBN2 209 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 CSPG4P5Q96PW8 444 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 CEP44Q9C0F1 390 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 WSB2Q9NYS7 404 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-207ENST00000445181 ACTL7AQ9Y615 435 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 CHD5Q8TDI0 1954 aa24.42■■□□□ 1.5
C9orf3-207ENST00000445181 ATXN2Q99700 1313 aaKnown RBP24.41■■□□□ 1.5
C9orf3-207ENST00000445181 CXorf51AA0A1B0GTR3 108 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 ARHGAP42A6NI28 874 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 ALOX15BO15296 676 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 IGLV3-19P01714 112 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 SERINC3Q13530 473 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 TCEAL1Q15170 157 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 ATP13A4Q4VNC1 1196 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 TMCO3Q6UWJ1 677 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 RAD9BQ6WBX8 426 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 OMDQ99983 421 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 GPR174Q9BXC1 333 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 NUSAP1Q9BXS6 441 aaKnown RBP24.41■■□□□ 1.5
C9orf3-207ENST00000445181 CALN1Q9BXU9 219 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 LRRC19Q9H756 370 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 KLHL11Q9NVR0 708 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 FBXL12Q9NXK8 326 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 TFR2Q9UP52 801 aa24.41■■□□□ 1.5
C9orf3-207ENST00000445181 C1QTNF3-AMACRE9PGA6 284 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 DFFAO00273 331 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 MCF2LO15068 1137 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 RNASEH2AO75792 299 aaKnown RBP24.4■■□□□ 1.5
C9orf3-207ENST00000445181 C5AR1P21730 350 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 AMPD1P23109 780 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 PAPOLAP51003 745 aaKnown RBP24.4■■□□□ 1.5
C9orf3-207ENST00000445181 GSDMDP57764 484 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 FAM46CQ5VWP2 391 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 SLC41A1Q8IVJ1 513 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 MAP7D3Q8IWC1 876 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 LZTR1Q8N653 840 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 PCDH20Q8N6Y1 951 aaKnown RBP24.4■■□□□ 1.5
C9orf3-207ENST00000445181 OR2A12Q8NGT7 310 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 SLC39A8Q9C0K1 460 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 KLC2Q9H0B6 622 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 BTBD1Q9H0C5 482 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 TMEM9BQ9NQ34 198 aa24.4■■□□□ 1.5
C9orf3-207ENST00000445181 RCOR3Q9P2K3 495 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-207ENST00000445181 NYNRINQ9P2P1 1898 aaKnown RBP24.4■■□□□ 1.5
C9orf3-207ENST00000445181 A0A1W2PP55 124 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 C7P10643 843 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 HOXD12P35452 270 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 SLC1A1P43005 524 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 PDK2Q15119 407 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 PEAR1Q5VY43 1037 aaPredicted RBP24.39■■□□□ 1.49
C9orf3-207ENST00000445181 SLC23A3Q6PIS1 610 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 USP30Q70CQ3 517 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 RYBPQ8N488 228 aaPredicted RBP24.39■■□□□ 1.49
C9orf3-207ENST00000445181 HDDC3Q8N4P3 179 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 NETO2Q8NC67 525 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 ACRBPQ8NEB7 543 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 HSPA12BQ96MM6 686 aa24.39■■□□□ 1.49
C9orf3-207ENST00000445181 TNRC6BQ9UPQ9 1833 aaKnown RBP24.39■■□□□ 1.49
C9orf3-207ENST00000445181 NCOR2Q9Y618 2525 aa24.38■■□□□ 1.49
C9orf3-207ENST00000445181 CDX4O14627 284 aaPredicted RBP24.38■■□□□ 1.49
C9orf3-207ENST00000445181 SPOPO43791 374 aa24.38■■□□□ 1.49
C9orf3-207ENST00000445181 CD160O95971 181 aa24.38■■□□□ 1.49
C9orf3-207ENST00000445181 CFIP05156 583 aa24.38■■□□□ 1.49
C9orf3-207ENST00000445181 ADRB1P08588 477 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms