RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TBC1D3KA0A087X1G2 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 A0A1B0GVT2 93 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3FA6NER0 549 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 ZSCAN5CA6NGD5 496 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 WASH4PA8MWX3 477 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3LB9A6J9 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 GIPC1O14908 333 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 VILLO15195 856 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 BNIP3LO60238 219 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 CTSLP07711 333 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3HP0C7X1 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 PSMA2P25787 234 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 EPHB2P29323 1055 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 METAP1P53582 386 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 YBEYP58557 167 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 ZBED6P86452 979 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 SHC2P98077 582 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 CNTN1Q12860 1018 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 POLD3Q15054 466 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 KIF19Q2TAC6 998 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 HGSNATQ68CP4 663 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3GQ6DHY5 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3CQ6IPX1 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 NEK5Q6P3R8 708 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 DBX2Q6ZNG2 339 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 VPS36Q86VN1 386 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3Q8IZP1 549 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 DEFB124Q8NES8 71 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 GAREM1Q9H706 876 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 CATSPERBQ9H7T0 1116 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 MRPL47Q9HD33 250 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 ANKRD6Q9Y2G4 727 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 SCINQ9Y6U3 715 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 FGF10O15520 208 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 DFNA5O60443 496 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 CD160O95971 181 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 TPM3P06753 285 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 SKILP12757 684 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 ACVRL1P37023 503 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 CARD16Q5EG05 197 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 DPY19L3Q6ZPD9 716 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 TRIM69Q86WT6 500 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 PSTKQ8IV42 348 aaKnown RBP19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 PYROXD2Q8N2H3 581 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 PPP1R16AQ96I34 528 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 LRIG1Q96JA1 1093 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 HDAC8Q9BY41 377 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 EBF2Q9HAK2 575 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 IL36AQ9UHA7 158 aa19.21■□□□□ 0.67
ATPAF2-201ENST00000444058 PCNX2A6NKB5 2137 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 KDELR3O43731 214 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 RNF8O76064 485 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 SERPING1P05155 500 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 CTSKP43235 329 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 PARP15Q460N3 678 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 PIP5KL1Q5T9C9 394 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 PRPF39Q86UA1 669 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 UMODL1-AS1Q8N2C9 162 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 CHST14Q8NCH0 376 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 CASKIN2Q8WXE0 1202 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 HEPHQ9BQS7 1158 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 TNKS2Q9H2K2 1166 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 DYRK4Q9NR20 520 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 TM7SF3Q9NS93 570 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 ANGPTL2Q9UKU9 493 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 DMTF1Q9Y222 760 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 LUC7L2Q9Y383 392 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 SNX11Q9Y5W9 270 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 WASF2Q9Y6W5 498 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 CHD5Q8TDI0 1954 aa19.2■□□□□ 0.66
ATPAF2-201ENST00000444058 KPNA3O00505 521 aaPredicted RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ATMINO43313 823 aaPredicted RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 CREB3O43889 395 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 CD38P28907 300 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ZNF135P52742 658 aaPredicted RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 TAS2R38P59533 333 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 SUZ12Q15022 739 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ACAP1Q15027 740 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 TDRD12Q587J7 1177 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 SLC45A4Q5BKX6 768 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ARSIQ5FYB1 569 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ERMARDQ5T6L9 678 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ERN2Q76MJ5 926 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ADAT2Q7Z6V5 191 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ARFGAP1Q8N6T3 406 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ZNF653Q96CK0 615 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 SLC6A18Q96N87 628 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 NOL6Q9H6R4 1146 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 IL21RQ9HBE5 538 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 ARHGAP20Q9P2F6 1191 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 FNDC3AQ9Y2H6 1198 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 FCF1Q9Y324 198 aaKnown RBP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 KNL1Q8NG31 2342 aa19.19■□□□□ 0.66
ATPAF2-201ENST00000444058 PLK4O00444 970 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 SH3BP5O60239 455 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms