RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TLR5O60602 858 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 IGSF6O95976 241 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 CREB1P16220 341 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 MILR1Q7Z6M3 343 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 PATL1Q86TB9 770 aaKnown RBP22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 GPSM1Q86YR5 675 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 LRRC49Q8IUZ0 686 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 EXOSC4Q9NPD3 245 aaKnown RBP22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 HDAC3O15379 428 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 MICU2Q8IYU8 434 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 RIN3Q8TB24 985 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 TMEM51Q9NW97 253 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 TEKT2Q9UIF3 430 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF112Q9UJU3 913 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 DNMT3LQ9UJW3 386 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 GLTPD2A6NH11 291 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 C2CD4BA6NLJ0 364 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 M0R3G1 203 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 HNRNPRO43390 633 aaKnown RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 C22orf31O95567 290 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 OR4Q2P0C623 313 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 CLCN5P51795 746 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 LILRA4P59901 499 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 CAMK2GQ13555 558 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 MON1AQ86VX9 555 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 KCTD15Q96SI1 283 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 SH3GL1Q99961 368 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 ALOX15P16050 662 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 EPB42P16452 691 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 FASP25445 335 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 CLK1P49759 484 aaKnown RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 RAB10P61026 200 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 NCALDP61601 193 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 TEX44Q53QW1 395 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 OTUD3Q5T2D3 398 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 LRRC8DQ7L1W4 858 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 PIWIL4Q7Z3Z4 852 aaKnown RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 DENND1CQ8IV53 801 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 C10orf107Q8IVU9 208 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 STAG3L4Q8TBR4 150 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 CASP10Q92851 521 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 SH3GL3Q99963 347 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 C2orf49Q9BVC5 232 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 TMEM109Q9BVC6 243 aa22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 UXTQ9UBK9 157 aaPredicted RBP22.7■■□□□ 1.22
CTDSPL-206ENST00000443503 A0A0G2JLL6 359 aaPredicted RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 EPHA3P29320 983 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 CCDC15Q0P6D6 951 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 CDC16Q13042 620 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 SDE2Q6IQ49 451 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PRRT2Q7Z6L0 340 aaPredicted RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ADCK1Q86TW2 530 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ALYREFQ86V81 257 aaKnown RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PLD3Q8IV08 490 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PYROXD2Q8N2H3 581 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ANKRD27Q96NW4 1050 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 WDR41Q9HAD4 459 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 C2P06681 752 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 GABRB2P47870 512 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PSEN1P49768 467 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 UBAP2LQ14157 1087 aaKnown RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PLEKHO2Q8TD55 490 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 HDAC10Q969S8 669 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 FBXL18Q96ME1 805 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PADI3Q9ULW8 664 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 FRG1Q14331 258 aaKnown RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 PTPRNQ16849 979 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF572Q7Z3I7 529 aaPredicted RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ANKRD23Q86SG2 305 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 CLUHO75153 1309 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 TMEM114B3SHH9 223 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 STAU1O95793 577 aaKnown RBP22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 USP4Q13107 963 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 BRMS1LQ5PSV4 323 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 POTEHQ6S545 545 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ATAD1Q8NBU5 361 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 TMEM159Q96B96 161 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF711Q9Y462 761 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
CTDSPL-206ENST00000443503 SEC22BO75396 215 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 HDCP19113 662 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 TRAF2Q12933 501 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 IMPAD1Q9NX62 359 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 BCLAF3A2AJT9 711 aaKnown RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 HNRNPCL2B2RXH8 293 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 MDM4O15151 490 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 BIRC5O15392 142 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 SMNDC1O75940 238 aaKnown RBP eCLIP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 CFHP08603 1231 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 SAMD4BQ5PRF9 694 aaKnown RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 OR52K2Q8NGK3 314 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ARHGEF4Q9NR80 690 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 RCOR3Q9P2K3 495 aaPredicted RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ARFGEF2Q9Y6D5 1785 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ATP6AP2A0A1C7CYW4 349 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 SHOX2O60902 331 aaPredicted RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ATP6AP2O75787 350 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 PCNAP12004 261 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ABL2P42684 1182 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms