RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 NRG1Q02297 640 aaPredicted RBP7.95□□□□□ -1.14
CD44-211ENST00000442151 SMAD1Q15797 465 aaKnown RBP7.95□□□□□ -1.14
CD44-211ENST00000442151 KIAA1161Q6NSJ0 714 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 CLEC17AQ6ZS10 378 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 STRADAQ7RTN6 431 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 SLCO6A1Q86UG4 719 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 XYLT1Q86Y38 959 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 AADATQ8N5Z0 425 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 FAM131CQ96AQ9 280 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 ISG20Q96AZ6 181 aaKnown RBP7.95□□□□□ -1.14
CD44-211ENST00000442151 HEPHQ9BQS7 1158 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 C1QTNF7Q9BXJ2 289 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 OSBPL1AQ9BXW6 950 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 HDAC8Q9BY41 377 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 SLC6A16Q9GZN6 736 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 OSBPL2Q9H1P3 480 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 MAGEH1Q9H213 219 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 MTG2Q9H4K7 406 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 ACP6Q9NPH0 428 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 KLHL11Q9NVR0 708 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 OR51B4Q9Y5P0 310 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 A0A1W2PR77 199 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 GOLGA8SH3BPF8 625 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 KPNA3O00505 521 aaPredicted RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 TOR1BO14657 336 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 BNIP3LO60238 219 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SRGAP2O75044 1071 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 RFPL3O75679 317 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PCDH8O95206 1070 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 ADCY5O95622 1261 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 TOP3BO95985 862 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 ATXN1LP0C7T5 689 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 SRCP12931 536 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 RHOQP17081 205 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CKMT2P17540 419 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 HNRNPA2B1P22626 353 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 SOX5P35711 763 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 NSFP46459 744 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 NEK3P51956 506 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 AIF1P55008 147 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SNRPD1P62314 119 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 GNA12Q03113 381 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SGCGQ13326 291 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CARD16Q5EG05 197 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 MIIPQ5JXC2 388 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 TAF3Q5VWG9 929 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 FBXL19Q6PCT2 694 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 ERN2Q76MJ5 926 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 HORMAD1Q86X24 394 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PROSER1Q86XN7 944 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 NEK11Q8NG66 645 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SAP25Q8TEE9 199 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 GLMNQ92990 594 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 MYEOVQ96EZ4 313 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 TBCBQ99426 244 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 ORAI3Q9BRQ5 295 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 DUSP23Q9BVJ7 150 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SELENOOQ9BVL4 669 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 NAA15Q9BXJ9 866 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 ATP13A1Q9HD20 1204 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PIGVQ9NUD9 493 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 IPO11Q9UI26 975 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 FHOD1Q9Y613 1164 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 F8VZ95 297 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 H3BM21 787 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CBX4O00257 560 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 AP1G1O43747 822 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 POP4O95707 220 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 KRT3P12035 628 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 EPHA8P29322 1005 aaPredicted RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 L1CAMP32004 1257 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 HTR7P34969 479 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 DRD3P35462 400 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PTPN9P43378 593 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SUOXP51687 545 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 POLR2FP61218 127 aaKnown RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 NOMO3P69849 1222 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PITX1P78337 314 aaPredicted RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 CNTN1Q12860 1018 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PTK2BQ14289 1009 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 GRM3Q14832 879 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 DPCR1Q3MIW9 517 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 FILIP1LQ4L180 1135 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 NAA35Q5VZE5 725 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 LRRC69Q6ZNQ3 347 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 Q6ZVU0 165 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 C14orf80Q86SX3 495 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CIR1Q86X95 450 aaPredicted RBP7.94□□□□□ -1.14
CD44-211ENST00000442151 EID2Q8N6I1 236 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 PNPLA1Q8N8W4 532 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 BTN2A2Q8WVV5 523 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 ASB12Q8WXK4 309 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 NXPE2Q96DL1 559 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 VPS16Q9H269 839 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CATSPERBQ9H7T0 1116 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 ADAM22Q9P0K1 906 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 OR12D3Q9UGF7 316 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 SERGEFQ9UGK8 458 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms