RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GPR107Q5VW38 600 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 DCDC5Q6ZRR9 648 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 HM13Q8TCT9 377 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 URGCPQ8TCY9 931 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 COPS5Q92905 334 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 ZNF669Q96BR6 464 aaPredicted RBP20.6■□□□□ 0.89
SHOX2-203ENST00000441443 ACE2Q9BYF1 805 aaPredicted RBP20.6■□□□□ 0.89
SHOX2-203ENST00000441443 TASP1Q9H6P5 420 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 FIS1Q9Y3D6 152 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 A0A0A0MRY4 1105 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 GOLGA8TH3BQL2 631 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 INO80B-WBP1J3KQ70 363 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 K7EPI3 171 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 ITGB3P05106 788 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 SPRP35270 261 aaPredicted RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 C21orf59P57076 290 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 RHDQ02161 417 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 PDCD4Q53EL6 469 aaKnown RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 FGD3Q5JSP0 725 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 GLRA4Q5JXX5 417 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 TTC33Q6PID6 262 aaPredicted RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 MAMDC4Q6UXC1 1216 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 DQX1Q8TE96 717 aaKnown RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 PLEKHA8Q96JA3 519 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 SPATA13Q96N96 652 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 ANKRD60Q9BZ19 345 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 SPATC1LQ9H0A9 340 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 SFMBT1Q9UHJ3 866 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 TSPAN16Q9UKR8 245 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 SAC3D1A6NKF1 404 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 ADAM23O75077 832 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 ARIH2O95376 493 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 MLNP12872 115 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 NHSL2Q5HYW2 709 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 NANOGP8Q6NSW7 305 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 LAYNQ6UX15 382 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 C1orf127Q8N9H9 656 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 ERLEC1Q96DZ1 483 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 UNKQ9C0B0 810 aaKnown RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 DRC3Q9H069 523 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 HIPK3Q9H422 1215 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 J3QRK9 145 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 PAPSS1O43252 624 aaPredicted RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 NFICP08651 508 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 LIMK2P53671 638 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 MAPK10P53779 464 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 C16orf87Q6PH81 154 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 LBX2Q6XYB7 198 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 CHSY3Q70JA7 882 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 LYSMD3Q7Z3D4 306 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 CENPSQ8N2Z9 138 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 FBXL8Q96CD0 374 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 NAA50Q9GZZ1 169 aaKnown RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 CXorf21Q9HAI6 301 aa20.59■□□□□ 0.89
SHOX2-203ENST00000441443 GMPR2Q9P2T1 348 aaKnown RBP20.59■□□□□ 0.89
SHOX2-203ENST00000441443 H0YJX3 145 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 PRKCBP05771 671 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 C8BP07358 591 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 ZFXP17010 805 aaPredicted RBP20.58■□□□□ 0.89
SHOX2-203ENST00000441443 UGT1A6P19224 532 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 UGT1A1P22309 533 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 UGT1A4P22310 534 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 UGT1A3P35503 534 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 UGT1A5P35504 534 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 MAGEA12P43365 314 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 BNIP3Q12983 259 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 PYROXD2Q8N2H3 581 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 DDHD1Q8NEL9 900 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 TRPC4APQ8TEL6 797 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 BORCS5Q969J3 196 aa20.58■□□□□ 0.89
SHOX2-203ENST00000441443 CNOT6Q9ULM6 557 aaKnown RBP20.58■□□□□ 0.89
SHOX2-203ENST00000441443 A0A087WXM4 84 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 PRORSD1PA6NEY8 169 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF839A8K0R7 811 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 CLIC3O95833 236 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 NSUN2Q08J23 767 aaKnown RBP eCLIP20.58■□□□□ 0.88
SHOX2-203ENST00000441443 NAB1Q13506 487 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 RFTN1Q14699 578 aaPredicted RBP20.58■□□□□ 0.88
SHOX2-203ENST00000441443 PMF1Q6P1K2 205 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 FBXO16Q8IX29 292 aaPredicted RBP20.58■□□□□ 0.88
SHOX2-203ENST00000441443 OR52K1Q8NGK4 314 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 SCYL1Q96KG9 808 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 RPF2Q9H7B2 306 aaKnown RBP20.58■□□□□ 0.88
SHOX2-203ENST00000441443 HESX1Q9UBX0 185 aa20.58■□□□□ 0.88
SHOX2-203ENST00000441443 H3BMQ9 156 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 RNF103O00237 685 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 AKAP10O43572 662 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 ZNF829Q3KNS6 432 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-203ENST00000441443 CLEC14AQ86T13 490 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 CNTD1Q8N815 330 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 DNERQ8NFT8 737 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 TBC1D15Q8TC07 691 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 SEPT1Q8WYJ6 367 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 COG8Q96MW5 612 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 CSPG4P5Q96PW8 444 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 GBA2Q9HCG7 927 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-203ENST00000441443 TRNAU1APQ9NX07 287 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms