RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 MAD1L1Q9Y6D9 718 aa17.31■□□□□ 0.36
TMEM39B-203ENST00000441402 E2F8A0AVK6 867 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 TYW5A2RUC4 315 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 TSPAN3O60637 253 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 RHOCP08134 193 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 GJA1P17302 382 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 MSH2P43246 934 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 PRSS36Q5K4E3 855 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 GPR158Q5T848 1215 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 RANBP10Q6VN20 620 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 TMEM135Q86UB9 458 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 ZNF354CQ86Y25 554 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 SLC44A1Q8WWI5 657 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 PABPC5Q96DU9 382 aaKnown RBP17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 CFAP36Q96G28 342 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 ABHD8Q96I13 439 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 PAFAH2Q99487 392 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 IL22Q9GZX6 179 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 ARNT2Q9HBZ2 717 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 NT5MQ9NPB1 228 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 CTNNAL1Q9UBT7 734 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 HCFC2Q9Y5Z7 792 aa17.3■□□□□ 0.36
TMEM39B-203ENST00000441402 NOTCH4Q99466 2003 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 FAM159BA6NKW6 160 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 LEFTY2O00292 366 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 ZNF197O14709 1029 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 SHOX2O60902 331 aaPredicted RBP17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 TBL1XO60907 577 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 MT-CYBP00156 380 aaPredicted RBP17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 TCF3P15923 654 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 HPDP32754 393 aaPredicted RBP17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 SLC14A2Q15849 920 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 KDELC1Q6UW63 502 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 BBS5Q8N3I7 341 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 OR7D4Q8NG98 312 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 ARRDC2Q8TBH0 407 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 DCAKDQ8WVC6 231 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 TCEAL4Q96EI5 215 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 GDF15Q99988 308 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 TBL1YQ9BQ87 522 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 ZNF180Q9UJW8 692 aa17.29■□□□□ 0.36
TMEM39B-203ENST00000441402 HELZP42694 1942 aaKnown RBP17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 FAM237BA0A1B0GVD1 139 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 USP12O75317 370 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 CSPG5O95196 566 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 POLBP06746 335 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 OXCT1P55809 520 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 RAB30Q15771 203 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 MPPE1Q53F39 396 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 SPANXN3Q5MJ09 141 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 IL31Q6EBC2 164 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 DENND5AQ6IQ26 1287 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 TRABD2AQ86V40 505 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 LRRC6Q86X45 466 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 ZNF707Q96C28 371 aaPredicted RBP17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 MRGPRX2Q96LB1 330 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 CAPS2Q9BXY5 557 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 POLR1EQ9GZS1 481 aaKnown RBP17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 UBP1Q9NZI7 540 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 SAMD15Q9P1V8 674 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 TBK1Q9UHD2 729 aa17.28■□□□□ 0.36
TMEM39B-203ENST00000441402 CCDC195A0A1B0GUA6 201 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 PER2O15055 1255 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 FAM155BO75949 473 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 USP1O94782 785 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 MMP2P08253 660 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 CES1P23141 567 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 AVPR1AP37288 418 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 PBX2P40425 430 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 MDH1P40925 334 aaKnown RBP17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 ATP1A2P50993 1020 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 NIPAL4Q0D2K0 466 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 OLIG2Q13516 323 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 TEAD2Q15562 447 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 DUSP6Q16828 381 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 RNF219Q5W0B1 726 aaPredicted RBP17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 CASC4Q6P4E1 433 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 SLC26A11Q86WA9 606 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 BBS7Q8IWZ6 715 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 PGBD5Q8N414 524 aa17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 TDRD5Q8NAT2 981 aaKnown RBP17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 PTCD2Q8WV60 388 aaKnown RBP17.27■□□□□ 0.36
TMEM39B-203ENST00000441402 CENPTQ96BT3 561 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms