RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TBC1D3CQ6IPX1 549 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 Q6ZVU0 165 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 STRADAQ7RTN6 431 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 TRIM69Q86WT6 500 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 TBC1D3Q8IZP1 549 aaPredicted RBP11.74□□□□□ -0.53
IRF1-204ENST00000439555 MFSD2AQ8NA29 543 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 ATP11CQ8NB49 1132 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 OR2A12Q8NGT7 310 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 PIP4K2CQ8TBX8 421 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 CENPIQ92674 756 aaPredicted RBP11.74□□□□□ -0.53
IRF1-204ENST00000439555 NXPE2Q96DL1 559 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 SERAC1Q96JX3 654 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 CFAP57Q96MR6 1250 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 SLC6A18Q96N87 628 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 ELF4Q99607 663 aaPredicted RBP11.74□□□□□ -0.53
IRF1-204ENST00000439555 ZYG11BQ9C0D3 744 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 CEP44Q9C0F1 390 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 OSBPL2Q9H1P3 480 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 PREBQ9HCU5 417 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
IRF1-204ENST00000439555 MGAQ8IWI9 3026 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 A0A0D9SEW6 157 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 C2CD4BA6NLJ0 364 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 TLR4O00206 839 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 EPHB6O15197 1021 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 RNGTTO60942 597 aaKnown RBP11.73□□□□□ -0.53
IRF1-204ENST00000439555 MT-CO1P00395 513 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 PRNPP04156 253 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 WNT1P04628 370 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 ITPKBP27987 946 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 SDC4P31431 198 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 CHRNA3P32297 505 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 RXRGP48443 463 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 KLK7P49862 253 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 CFHR1Q03591 330 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 PTP4A2Q12974 167 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 RTP5Q14D33 572 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 SYCP1Q15431 976 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 CCDC14Q49A88 953 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 C2CD6Q53TS8 623 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 AGBL4Q5VU57 503 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 GPR155Q7Z3F1 870 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 FAM131BQ86XD5 332 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 PHF13Q86YI8 300 aaPredicted RBP11.73□□□□□ -0.53
IRF1-204ENST00000439555 OXR1Q8N573 874 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 NEK11Q8NG66 645 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 NRSN2Q9GZP1 204 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 METTL5Q9NRN9 209 aaKnown RBP11.73□□□□□ -0.53
IRF1-204ENST00000439555 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 ARHGAP20Q9P2F6 1191 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 OR12D3Q9UGF7 316 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
IRF1-204ENST00000439555 CYSRT1A8MQ03 144 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 PRAMEF26H0Y7S4 382 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 SNAP91O60641 907 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 SRGAP2O75044 1071 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 RTN2O75298 545 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 CALB1P05937 261 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 KRT3P12035 628 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 RHOQP17081 205 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 RECQLP46063 649 aaPredicted RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 MAPKAPK2P49137 400 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 ARRB1P49407 418 aaPredicted RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 METAP1P53582 386 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 NXPH1P58417 271 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 ATP11AP98196 1134 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 GNA12Q03113 381 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 UBXN1Q04323 297 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 CNTN1Q12860 1018 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 NCAPHQ15003 741 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 SETMARQ53H47 684 aaPredicted RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 MANEALQ5VSG8 457 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 TFAP2DQ7Z6R9 452 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 CACTIN-AS1Q8N1I8 211 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 PCDH20Q8N6Y1 951 aaKnown RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 EMC1Q8N766 993 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 SLC30A5Q8TAD4 765 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 RXFP2Q8WXD0 754 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 BAP1Q92560 729 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
IRF1-204ENST00000439555 ISG20Q96AZ6 181 aaKnown RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 FCRL3Q96P31 734 aaPredicted RBP11.72□□□□□ -0.53
IRF1-204ENST00000439555 HDAC8Q9BY41 377 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms