RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 INTS7Q9NVH2 962 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 SIRPGQ9P1W8 387 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ASTN1O14525 1302 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 CPED1A4D0V7 1026 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 MYO1CO00159 1063 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 FYNP06241 537 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 SPATA31C1P0DKV0 1188 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 KDELR1P24390 212 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 PARP6Q2NL67 630 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 BRMS1LQ5PSV4 323 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 NLRP14Q86W24 1093 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 HID1Q8IV36 788 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ST13P5Q8NFI4 369 aaPredicted RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 OR56A4Q8NGH8 313 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 POF1BQ8WVV4 589 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 KLK6Q92876 244 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 Q9Y3F1 56 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ZFP37Q9Y6Q3 630 aaPredicted RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 DUSP10Q9Y6W6 482 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 A0A087X0B3 334 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 MATKP42679 507 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 IRF8Q02556 426 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 LINGO4Q6UY18 593 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 RBM43Q6ZSC3 357 aaKnown RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 BEND7Q8N7W2 519 aaPredicted RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 PAFAH2Q99487 392 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 SLC38A3Q99624 504 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 PCDH9Q9HC56 1237 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 NR5A2O00482 541 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 FPGTO14772 594 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 GOT1P17174 413 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 TACR2P21452 398 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 CNTFP26441 200 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 PRKAG1P54619 331 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 VSNL1P62760 191 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 NFYCQ13952 458 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 DEFB119Q8N690 84 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 CMTM5Q96DZ9 223 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 FAM84AQ96KN4 292 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ISCUQ9H1K1 167 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ALKBH4Q9NXW9 302 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 NCKIPSDQ9NZQ3 722 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 PSME2Q9UL46 239 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 FGF18O76093 207 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 GSNP06396 782 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 IDSP22304 550 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 CRABP2P29373 138 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 SERPINB5P36952 375 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 CAPRIN2Q6IMN6 1127 aaKnown RBP12.25□□□□□ -0.45
NEK1-201ENST00000439128 FBXL16Q8N461 479 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 METTL6Q8TCB7 284 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 SH3RF2Q8TEC5 729 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 METTL21AQ8WXB1 218 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ATL1Q8WXF7 558 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■■■ 32.7
NEK1-201ENST00000439128 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 KRT84Q9NSB2 600 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 PCDHB11Q9Y5F2 797 aa12.25□□□□□ -0.45
NEK1-201ENST00000439128 ZNF682O95780 498 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 RARAP10276 462 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 UQCRBP14927 111 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 SLC26A11Q86WA9 606 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 PSTKQ8IV42 348 aaKnown RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 ARID3BQ8IVW6 561 aaPredicted RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 SCAIQ8N9R8 606 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 SNX27Q96L92 541 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ACBD6Q9BR61 282 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 OSBPL10Q9BXB5 764 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 MID1IP1Q9NPA3 183 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CLUHO75153 1309 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CNPP09543 421 aaKnown RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 GUCY1A3Q02108 690 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 LRIG3Q6UXM1 1119 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 C2orf15Q8WU43 125 aaKnown RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 OSBPL6Q9BZF3 934 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 WHRNQ9P202 907 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 POLG2Q9UHN1 485 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 VAV3Q9UKW4 847 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CSF2RAP15509 400 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ATP4AP20648 1035 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ITGAXP20702 1163 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 HPCAL1P37235 193 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 AMZ1Q400G9 498 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 OR52K1Q8NGK4 314 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 RIN3Q8TB24 985 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ZNF214Q9UL59 606 aaPredicted RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 COX7A2P14406 83 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CPA3P15088 417 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 GRK2P25098 689 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 PIK3CGP48736 1102 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms