RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ACOT8O14734 319 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZSCAN9O15535 394 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 FGF3P11487 239 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 HOXA11P31270 313 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 MLH1P40692 756 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 GSTM5P46439 218 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 KCNJ4P48050 445 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 GAD2Q05329 585 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 LTBQ06643 244 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 DAG1Q14118 895 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZNF628Q5EBL2 1059 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZNF474Q6S9Z5 364 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 USP43Q70EL4 1123 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 SUGP1Q8IWZ8 645 aaKnown RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 DDIASQ8IXT1 998 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 LAS2Q8IYD9 372 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 NUDCD2Q8WVJ2 157 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 CENPIQ92674 756 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 PMM1Q92871 262 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 PHKBQ93100 1093 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 LRRC46Q96FV0 321 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 MED30Q96HR3 178 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 NUP62CLQ9H1M0 184 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 CDCP1Q9H5V8 836 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 PNPLA8Q9NP80 782 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 TXLNGQ9NUQ3 528 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 LAMP3Q9UQV4 416 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 PCDHGB6Q9Y5F9 930 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 FRYLO94915 3013 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 NSD3Q9BZ95 1437 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 TOGARAM1Q9Y4F4 1720 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 FREM2Q5SZK8 3169 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 E9PCH4 1651 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 RPS10-NUDT3A0A1W2PQS6 291 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 CLCA1A8K7I4 914 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 VSTM5A8MXK1 200 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 AREL1O15033 823 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 KCNQ3O43525 872 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 IFNA2P01563 188 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 WNT1P04628 370 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 RHCEP18577 417 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 MST1P26927 711 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 SLC5A2P31639 672 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 CIITAP33076 1130 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 GBX1Q14549 363 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 NFATC4Q14934 902 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 PLEKHG6Q3KR16 790 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 ASPHD1Q5U4P2 390 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 MRNIPQ6NTE8 343 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 CCDC144NLQ6NUI1 221 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 LRIG3Q6UXM1 1119 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 FAM47BQ8NA70 645 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZBTB8BQ8NAP8 495 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 LMLNQ96KR4 655 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 EIF3CQ99613 913 aaKnown RBP3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 APOL5Q9BWW9 433 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 CLMPQ9H6B4 373 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 WNT16Q9UBV4 365 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 ANGPTL2Q9UKU9 493 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 CORO2BQ9UQ03 480 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 KMT2EQ8IZD2 1858 aa3.28□□□□□ -1.88
HMGB1P18-201ENST00000438801 TRIOO75962 3097 aa3.28□□□□□ -1.89
HMGB1P18-201ENST00000438801 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 UBR3Q6ZT12 1888 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 IFITM10A6NMD0 228 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 RHODO00212 210 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ACAA1P09110 424 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 RFPL3SP0C7P2 107 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 NBL1P41271 181 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 RFX2P48378 723 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ENTPD1P49961 510 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 EGR4Q05215 589 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ATP1A4Q13733 1029 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 KEAP1Q14145 624 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 P3H1Q32P28 736 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 USP17L6PQ6QN14 398 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 KIAA0408Q6ZU52 694 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 PIK3AP1Q6ZUJ8 805 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 TOM1L2Q6ZVM7 507 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 TRILQ7L0X0 811 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 CCDC28AQ8IWP9 274 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 MYO1HQ8N1T3 1032 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ATP11CQ8NB49 1132 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 CCDC150Q8NCX0 1101 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ELP5Q8TE02 316 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 INPP5DQ92835 1189 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 CLMNQ96JQ2 1002 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 GPR78Q96P69 363 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 ELOVL1Q9BW60 279 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 MAGEB5Q9BZ81 275 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 FZD8Q9H461 694 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 TASP1Q9H6P5 420 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 CD93Q9NPY3 652 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 HIF1ANQ9NWT6 349 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 PLK2Q9NYY3 685 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 GGA3Q9NZ52 723 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 MDFICQ9P1T7 246 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 B3GNT3Q9Y2A9 372 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 RAI2Q9Y5P3 530 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms