RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SIK2Q9H0K1 926 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 RAB6BQ9NRW1 208 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 TMEM51Q9NW97 253 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 RRN3Q9NYV6 651 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 DKK4Q9UBT3 224 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 AK5Q9Y6K8 562 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 CEP192Q8TEP8 1941 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 GTPBP10A4D1E9 387 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 M0QYT0 321 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 TAF4O00268 1085 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 RRP8O43159 456 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 LATO43561 262 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 PAGE1O75459 146 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 DKK1O94907 266 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ADCY5O95622 1261 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PRNPP04156 253 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 BMP6P22004 513 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 AKT2P31751 481 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ABCG1P45844 678 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 SULT1E1P49888 294 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PLK1P53350 603 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 CDH4P55283 916 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 PPP2CBP62714 309 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PPP2CAP67775 309 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PITX1P78337 314 aaPredicted RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 DAB2P98082 770 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 SEMG2Q02383 582 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 CNTN1Q12860 1018 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 RAPGEF1Q13905 1077 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 DLG2Q15700 870 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ACBD5Q5T8D3 534 aaPredicted RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 CXorf57Q6NSI4 855 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 GJB7Q6PEY0 223 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 LRRC69Q6ZNQ3 347 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 SLC26A9Q7LBE3 791 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 TRIM69Q86WT6 500 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 MARCH9Q86YJ5 346 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ZDHHC17Q8IUH5 632 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 TMEM35BQ8NCS4 154 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PIP4K2CQ8TBX8 421 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PTPRN2Q92932 1015 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PPP1R16AQ96I34 528 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PRMT1Q99873 361 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 ORAI3Q9BRQ5 295 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 FEM1AQ9BSK4 669 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ERVMER34-1Q9H9K5 563 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 PREBQ9HCU5 417 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 ACP6Q9NPH0 428 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 CYTH4Q9UIA0 394 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 MUC22E2RYF6 1773 aaPredicted RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 URB1O60287 2271 aaKnown RBP7.96□□□□□ -1.14
VPS50-204ENST00000438395 NBEAQ8NFP9 2946 aa7.96□□□□□ -1.14
VPS50-204ENST00000438395 KNTC1P50748 2209 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 A0A1W2PR77 199 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 PLK4O00444 970 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 MCF2LO15068 1137 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ATP9BO43861 1147 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 SDC3O75056 442 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 PCDH8O95206 1070 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 F9P00740 461 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ERBB2P04626 1255 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 WNT1P04628 370 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ALPPL2P10696 532 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 PRLRP16471 622 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 SLC9A1P19634 815 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 NOS2P35228 1153 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 DRD3P35462 400 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ACADVLP49748 655 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
VPS50-204ENST00000438395 DNA2P51530 1060 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 SLC6A3Q01959 620 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 DEUP1Q05D60 604 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 DNAJC3Q13217 504 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ILKQ13418 452 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 CAMK4Q16566 473 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 BRMS1LQ5PSV4 323 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
VPS50-204ENST00000438395 HES3Q5TGS1 186 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 AGBL4Q5VU57 503 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 RETSATQ6NUM9 610 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 OLFML1Q6UWY5 402 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 TFAP2DQ7Z6R9 452 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 DCAF4L2Q8NA75 395 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 MLKLQ8NB16 471 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 FRS2Q8WU20 508 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 NANOS1Q8WY41 292 aaKnown RBP7.95□□□□□ -1.14
VPS50-204ENST00000438395 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 MYOCQ99972 504 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 CALN1Q9BXU9 219 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 TKTL2Q9H0I9 626 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 WDCPQ9H6R7 721 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms