RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PLTPP55058 493 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 GAB4Q2WGN9 574 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 RNASEH2BQ5TBB1 312 aaKnown RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 RETSATQ6NUM9 610 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 HIBCHQ6NVY1 386 aaPredicted RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 PPIL6Q8IXY8 311 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 AHI1Q8N157 1196 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 TAB3Q8N5C8 712 aaPredicted RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 CPT1BQ92523 772 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 NXPE3Q969Y0 559 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 ZNF419Q96HQ0 510 aaPredicted RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 ZDHHC18Q9NUE0 388 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 HAUS2Q9NVX0 235 aa23.43■■□□□ 1.34
CPSF4-204ENST00000436336 FARP1Q9Y4F1 1045 aaPredicted RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 SPTBN5Q9NRC6 3674 aaKnown RBP23.43■■□□□ 1.34
CPSF4-204ENST00000436336 TP73O15350 636 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 HLA-DQB2P05538 268 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 NFKB1P19838 968 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 ECHS1P30084 290 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 GEMIN4P57678 1058 aaKnown RBP23.42■■□□□ 1.34
CPSF4-204ENST00000436336 SEMA5AQ13591 1074 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 MORF4L2Q15014 288 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 PUS10Q3MIT2 529 aaKnown RBP23.42■■□□□ 1.34
CPSF4-204ENST00000436336 FUT11Q495W5 492 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 INO80DQ53TQ3 878 aaPredicted RBP23.42■■□□□ 1.34
CPSF4-204ENST00000436336 ZDHHC24Q6UX98 284 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 LEKR1Q6ZMV7 388 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 HOOK3Q86VS8 718 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 GTSE1Q9NYZ3 720 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 SLC27A6Q9Y2P4 619 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 ATP8A1Q9Y2Q0 1164 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 EYSQ5T1H1 3165 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 SMAPO00193 183 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 ARNTLO00327 626 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 TULP3O75386 442 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 CISD3P0C7P0 127 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 MYBL2P10244 700 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 PSMB4P28070 264 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 ZNF235Q14590 738 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 BRD3Q15059 726 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 FAXCQ5TGI0 409 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 C12orf40Q86WS4 652 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 FBXO25Q8TCJ0 367 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 NEUROG2Q9H2A3 272 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 BRD9Q9H8M2 597 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 GLOD4Q9HC38 313 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 NT5MQ9NPB1 228 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 SEPT3Q9UH03 358 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 SHOC2Q9UQ13 582 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 FAM50BQ9Y247 325 aa23.42■■□□□ 1.34
CPSF4-204ENST00000436336 COL4A2P08572 1712 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 CD160O95971 181 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 MAGEA6P43360 314 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 SULT2A1Q06520 285 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 KCNJ11Q14654 390 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 ITPRIPL2Q3MIP1 535 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 PTCRAQ6ISU1 281 aaPredicted RBP23.41■■□□□ 1.34
CPSF4-204ENST00000436336 NAT8LQ8N9F0 302 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 WFIKKN2Q8TEU8 576 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 EXOC4Q96A65 974 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 PPP1R2P1Q96PQ5 205 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 FCRL5Q96RD9 977 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 CINPQ9BW66 212 aaPredicted RBP23.41■■□□□ 1.34
CPSF4-204ENST00000436336 TTLL3Q9Y4R7 772 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 ACTL7AQ9Y615 435 aa23.41■■□□□ 1.34
CPSF4-204ENST00000436336 CCDC151A5D8V7 595 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 GJA4P35212 333 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 SLC20A2Q08357 652 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 LINGO4Q6UY18 593 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 METTL3Q86U44 580 aaKnown RBP23.4■■□□□ 1.34
CPSF4-204ENST00000436336 ADIPOR2Q86V24 386 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 PSKH2Q96QS6 385 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 DEC1Q9P2X7 70 aa23.4■■□□□ 1.34
CPSF4-204ENST00000436336 MTRF1LQ9UGC7 380 aaKnown RBP23.4■■□□□ 1.34
CPSF4-204ENST00000436336 E7EVH7 732 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 TRIM24O15164 1050 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 ERLIN1O75477 346 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 TPSB2P20231 275 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 PRPSAP1Q14558 356 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 CYTH1Q15438 398 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 TPSAB1Q15661 275 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 AAK1Q2M2I8 961 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 GRAMD4Q6IC98 578 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 GSPT2Q8IYD1 628 aaKnown RBP23.39■■□□□ 1.34
CPSF4-204ENST00000436336 PRCCQ92733 491 aaPredicted RBP23.39■■□□□ 1.34
CPSF4-204ENST00000436336 POLR1EQ9GZS1 481 aaKnown RBP23.39■■□□□ 1.34
CPSF4-204ENST00000436336 KCNK12Q9HB15 430 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 ANKRD36A6QL64 1941 aa23.39■■□□□ 1.34
CPSF4-204ENST00000436336 APRTP07741 180 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 POLR2EP19388 210 aaKnown RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 HSPA9P38646 679 aaKnown RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 EIF2DP41214 584 aaKnown RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 SLC6A11P48066 632 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 SERPINH1P50454 418 aaKnown RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 GEN1Q17RS7 908 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 MAP9Q49MG5 647 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 ANKRD22Q5VYY1 191 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 MBLAC2Q68D91 279 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 PGBD5Q8N414 524 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 CSGALNACT1Q8TDX6 532 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms