RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 MPPE1Q53F39 396 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 CAPRIN2Q6IMN6 1127 aaKnown RBP10.72□□□□□ -0.69
CPNE1-214ENST00000435747 MSANTD2Q6P1R3 559 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 ARHGAP18Q8N392 663 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 PPM1KQ8N3J5 372 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 AADATQ8N5Z0 425 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
CPNE1-214ENST00000435747 STRADBQ9C0K7 418 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 CNGB3Q9NQW8 809 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 MARCH2Q9P0N8 246 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 CYTH4Q9UIA0 394 aa10.72□□□□□ -0.69
CPNE1-214ENST00000435747 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 GNA14O95837 355 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 DDAH2O95865 285 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 ADH1BP00325 375 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 FYNP06241 537 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 JMJD7P0C870 316 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 HGFP14210 728 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 CD19P15391 556 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 BRD2P25440 801 aaKnown RBP10.71□□□□□ -0.69
CPNE1-214ENST00000435747 GPD2P43304 727 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 MLLT10P55197 1068 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 KLRB1Q12918 225 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 NR0B2Q15466 257 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 HNRNPA1L2Q32P51 320 aaKnown RBP10.71□□□□□ -0.69
CPNE1-214ENST00000435747 SETMARQ53H47 684 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-214ENST00000435747 C1QL3Q5VWW1 255 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 BSPRYQ5W0U4 402 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 DPY19L2P1Q6NXN4 242 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 RRAGAQ7L523 313 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 ZFAND4Q86XD8 727 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.71□□□□□ -0.69
CPNE1-214ENST00000435747 CLEC4CQ8WTT0 213 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 PLD4Q96BZ4 506 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 SLC12A9Q9BXP2 914 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 CALN1Q9BXU9 219 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 INTS2Q9H0H0 1204 aaKnown RBP10.71□□□□□ -0.69
CPNE1-214ENST00000435747 CAAP1Q9H8G2 361 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 HESX1Q9UBX0 185 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 PISDQ9UG56 409 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 RWDD2AQ9UIY3 292 aa10.71□□□□□ -0.69
CPNE1-214ENST00000435747 BECN2A8MW95 431 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 MUSKO15146 869 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 SEMA7AO75326 666 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 C5AR1P21730 350 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 SLC8A3P57103 927 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 HNRNPKP61978 463 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 DRAP1Q14919 205 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 CAMK4Q16566 473 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 MEA1Q16626 185 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 PERM1Q5SV97 790 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 C9orf64Q5T6V5 341 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 TRIM65Q6PJ69 517 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 RSRC2Q7L4I2 434 aaKnown RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 KIAA0907Q7Z7F0 614 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 HEATR4Q86WZ0 1026 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 EDEM1Q92611 657 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 HSFY1Q96LI6 401 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 MYOCQ99972 504 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 LRRC4Q9HBW1 653 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 OLA1Q9NTK5 396 aaKnown RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 CHMP5Q9NZZ3 219 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 DKK3Q9UBP4 350 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 SFMBT1Q9UHJ3 866 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 HBS1LQ9Y450 684 aaKnown RBP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 PCDHB4Q9Y5E5 795 aa10.7□□□□□ -0.7
CPNE1-214ENST00000435747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPNE1-214ENST00000435747 PRAMEF33A0A0G2JMD5 474 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 M0QYV0 167 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 CASC3O15234 703 aaKnown RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 MSI1O43347 362 aaKnown RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 PRAMEF10O60809 474 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 RNGTTO60942 597 aaKnown RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 LATS1O95835 1130 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 PRKCGP05129 697 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 RGS7P49802 495 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 APBA1Q02410 837 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 EIF4EBP2Q13542 120 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 STILQ15468 1287 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 LACTB2Q53H82 288 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 ZNF542PQ5EBM4 170 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 B3GNT8Q7Z7M8 397 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 DTX1Q86Y01 620 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 GALNT11Q8NCW6 608 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 ZNF548Q8NEK5 533 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-214ENST00000435747 GLMNQ92990 594 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 NAT6Q93015 286 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 IFT43Q96FT9 208 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 MYO19Q96H55 970 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 CATSPER2Q96P56 530 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 CCDC3Q9BQI4 270 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 SIX2Q9NPC8 291 aa10.69□□□□□ -0.7
CPNE1-214ENST00000435747 ACP6Q9NPH0 428 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms